Gene Synpcc7942_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0738 
Symbol 
ID3775910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp732710 
End bp733270 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content62% 
IMG OID637799152 
ProductPhage baseplate assembly protein V 
Protein accessionYP_399757 
Protein GI81299549 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCCC AGTGGCTTGA GCGCGGCGAC GCCACAACTT CCGGCGTCGG CGACTACGAA 
GCGAGCGATC ACAGTCGGCG TCACGGCAAC TTGCTCCGCG TAGGCAGGGT AGCCGAGGCT
GACTATCCCA AGGGGCTGAT CCGTGTCGCG ATCGAGGAAG ACGAGGAGAG CGGCGAGGCG
CTGCTCCTCA CTGACTGGAT TCCGTGGCTC ACGCAGCGAG CGGGCAAGGA TCGGTTCTGG
TGGGCGCCCG AGGTCGGTGA GGCCGTCGTC GTGATGGCCC CCTCCGGCGA GATCAGTCAG
GGCTTCGCGA TGCCCGGCGC GTTCTCGACT GACTACCCCC AGATCGAGGA CAAAGAAACG
ATCCAAAAGA CGCAGTTCGA GGATGACTCA ATCATCCAGT ACGACCGCGA AGCGCATGAG
TACAAGATCG ACCTCACCGC AGCCCAAGGA CGGATTGTGA TCCTTGTGCA GGAGGCGCAA
GTCGAAGCCC AAGGCGACGT TAACGTGACC GCCGAGGGCA ACGTTACAGT GACCGCAAGT
CGTATTGACC TAAACCCGTG A
 
Protein sequence
MAPQWLERGD ATTSGVGDYE ASDHSRRHGN LLRVGRVAEA DYPKGLIRVA IEEDEESGEA 
LLLTDWIPWL TQRAGKDRFW WAPEVGEAVV VMAPSGEISQ GFAMPGAFST DYPQIEDKET
IQKTQFEDDS IIQYDREAHE YKIDLTAAQG RIVILVQEAQ VEAQGDVNVT AEGNVTVTAS
RIDLNP