| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0717 |
|---|
| Symbol | |
|---|
| ID | 3775888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 713127 |
|---|
| End bp | 713651 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637799130 |
|---|
| Product | dCTP deaminase |
|---|
| Protein accession | YP_399736 |
|---|
| Protein GI | 81299528 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.167167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCTCG TCGACCACGA AATCAGAGCG CTCTGCGAAG CCGGCATGGT CAGCCCGTTT
GACCCAGACC TGATCAACCC GGCCAGTCTC GACGTGCGCC TCGGCCCCAA CATCATGATC
GAGACGCCGA ACAGTCCAAG CTTGCAGAAG CGATCGATCG CAGACTACTG CGAAGAAAGC
CCCTACCTCA TTGACCCATC CGAGTGGTTC TTGGGTGAAA CCCTGGAGCT GTTCAACATT
CCGCGATCGC TTGCTGCCAA GTTCGTTCTT AAGAGCAGCC GAGCCCGAGA AGGGATCAAC
CATCTCTATG CAGGCTTTGC GGACCCACGC TTCCACAACT CCGTACTGAC CTTAGAAATC
GTCAACGTCC GGCGGTTTCA TCCCGTTCCC ATCTGGCCAG GGATGCTGAT CGGGCAACTG
ATTTTCTGGC GCTTGAGCGA CGAGCCAGAG CGGGATTACT CCGTGACCGG TCGCTACAAC
GACTGCCTGA CTGTGACCGC TAGCAAAGAC GCGGGGAAGT CCTGA
|
|---|
| Protein sequence | MILVDHEIRA LCEAGMVSPF DPDLINPASL DVRLGPNIMI ETPNSPSLQK RSIADYCEES
PYLIDPSEWF LGETLELFNI PRSLAAKFVL KSSRAREGIN HLYAGFADPR FHNSVLTLEI
VNVRRFHPVP IWPGMLIGQL IFWRLSDEPE RDYSVTGRYN DCLTVTASKD AGKS
|
|---|
| |