Gene Synpcc7942_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0705 
Symbol 
ID3775875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp695935 
End bp696570 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID637799117 
Producthypothetical protein 
Protein accessionYP_399724 
Protein GI81299516 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.255488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAG TTGAGTCAAT CAGTCCCTAT CTTGCTGTGA GTTCTGTGAT CAATTTCGAT 
CATCCCTCGA TTCAAATCTT GGCGGCAGAA CTTCGGGCTG ATCAGACTTC TACAACGGCG
ATCGCTCAGG CTTGCTTTGA ATGGGTGCGC GATCAGATTC GCCATAGTTC CGACTATCAA
CTTAATCCTG TCACTTGTCG CGCTTCAGAG GTGCTGGAGC ATCGAACCGG CTATTGCTAC
GCCAAAAGTC ATCTGTTGGT TGCACTGCTG CGGGCTTGCT CAATTCCAGC GGGCTTTTGC
TATCAGCGAC TCAGCTTTGA TGAAGCGAGC GAGCGCTACT GCTTGCATGG ATTAGTGGCT
GTAAAACTCC CGGGACTTGG TTGGTATCGC CTCGATCCAC GAGGCAATAA AGCGGACATT
GATGCTCAGT TTTGCCCACC GCAAGAGCAG CTTGCCTACT CAGCACAGCA GCTGGGGGAA
GCCGACTGGC CCGTGATTTT TGCGGAGCCT CTTCCGATTG TTGTCCAGAC TCTTCAAGCC
AGTCTTGATT GGGAGTCTGT ACTGGCGGCA ATTCCTGACA TTGCACTGGC GGATTTTGCA
GTGATGACTC AAGGTTTAGA GTCGGTTTCT TGCTGA
 
Protein sequence
MSAVESISPY LAVSSVINFD HPSIQILAAE LRADQTSTTA IAQACFEWVR DQIRHSSDYQ 
LNPVTCRASE VLEHRTGYCY AKSHLLVALL RACSIPAGFC YQRLSFDEAS ERYCLHGLVA
VKLPGLGWYR LDPRGNKADI DAQFCPPQEQ LAYSAQQLGE ADWPVIFAEP LPIVVQTLQA
SLDWESVLAA IPDIALADFA VMTQGLESVS C