Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0705 |
Symbol | |
ID | 3775875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 695935 |
End bp | 696570 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637799117 |
Product | hypothetical protein |
Protein accession | YP_399724 |
Protein GI | 81299516 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.255488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAG TTGAGTCAAT CAGTCCCTAT CTTGCTGTGA GTTCTGTGAT CAATTTCGAT CATCCCTCGA TTCAAATCTT GGCGGCAGAA CTTCGGGCTG ATCAGACTTC TACAACGGCG ATCGCTCAGG CTTGCTTTGA ATGGGTGCGC GATCAGATTC GCCATAGTTC CGACTATCAA CTTAATCCTG TCACTTGTCG CGCTTCAGAG GTGCTGGAGC ATCGAACCGG CTATTGCTAC GCCAAAAGTC ATCTGTTGGT TGCACTGCTG CGGGCTTGCT CAATTCCAGC GGGCTTTTGC TATCAGCGAC TCAGCTTTGA TGAAGCGAGC GAGCGCTACT GCTTGCATGG ATTAGTGGCT GTAAAACTCC CGGGACTTGG TTGGTATCGC CTCGATCCAC GAGGCAATAA AGCGGACATT GATGCTCAGT TTTGCCCACC GCAAGAGCAG CTTGCCTACT CAGCACAGCA GCTGGGGGAA GCCGACTGGC CCGTGATTTT TGCGGAGCCT CTTCCGATTG TTGTCCAGAC TCTTCAAGCC AGTCTTGATT GGGAGTCTGT ACTGGCGGCA ATTCCTGACA TTGCACTGGC GGATTTTGCA GTGATGACTC AAGGTTTAGA GTCGGTTTCT TGCTGA
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Protein sequence | MSAVESISPY LAVSSVINFD HPSIQILAAE LRADQTSTTA IAQACFEWVR DQIRHSSDYQ LNPVTCRASE VLEHRTGYCY AKSHLLVALL RACSIPAGFC YQRLSFDEAS ERYCLHGLVA VKLPGLGWYR LDPRGNKADI DAQFCPPQEQ LAYSAQQLGE ADWPVIFAEP LPIVVQTLQA SLDWESVLAA IPDIALADFA VMTQGLESVS C
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