Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0702 |
Symbol | |
ID | 3775872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 693257 |
End bp | 694045 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799114 |
Product | hypothetical protein |
Protein accession | YP_399721 |
Protein GI | 81299513 |
COG category | [S] Function unknown |
COG ID | [COG1912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00401534 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.259483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGCC TGCTGACCTT ACTGACGGAT TTTGGGTCGC AGGACAGTTA CGTGGGGGCG ATGAAAGGGG TGATTTATTC CCTCTGCCCG CAGGCAACCC TAGTTGATTT GTGTCATGAA GTTCCAGCAC AGGATGTGGC GGCAGGGCGT TGGCAGTTAT TGCAAGCCGT GCCCTACTTC CCAGCCGGCA GCGTGCACCT GGCTGTTGTG GATCCGGACG TGGGTAGTGA TCGCCGCGCT GTGGTCATTG AAACCGCGAT CGGCCTATTA ATTGGCCCTG ACAATGGCCT TTGGAGTGGC GTCCTCAGTC GCTTTCCAGC ACAACGGGCA GTTAGCCTCA CTAACCCGAA CTACTGGCAA TCGCCCCAGC CTGATCCGAC TTTCCATGGT CGCGACATTT TTGCACCGGT GGCCGCTCAT TTGCTCAATG GCGTGCCGTT GACTGAGCTG GGGCCTCTGA TCGATCCCGC TTCCCTGCAG ACTCTGATCG AGTCGCACCC GCAGCGATCG GATCAGGGTT GGCAGGGACA AATTCAGGCG ATCGATCGCT TTGGCAACTT GATCACCAAT CTTCCAGCCG AACTGGGTCA AACAGCGGCA GGTCTGATCT GGGGCGATCG CTGGTTGCCC TTGGCTCGGA CTTACAGCGA GGTTGCGATT GGCGAGCTGC TGGTGCTGGC AGGGAGTCAT GGCTATTTGG AAATCGCCCA GCGTAACGGC TCTGCGCAGC AGACTTTAGC AGCCAACATG GGCGCAGTCG TGCGATTGGT CTGTGGGCGG GCACCCTAG
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Protein sequence | MSRLLTLLTD FGSQDSYVGA MKGVIYSLCP QATLVDLCHE VPAQDVAAGR WQLLQAVPYF PAGSVHLAVV DPDVGSDRRA VVIETAIGLL IGPDNGLWSG VLSRFPAQRA VSLTNPNYWQ SPQPDPTFHG RDIFAPVAAH LLNGVPLTEL GPLIDPASLQ TLIESHPQRS DQGWQGQIQA IDRFGNLITN LPAELGQTAA GLIWGDRWLP LARTYSEVAI GELLVLAGSH GYLEIAQRNG SAQQTLAANM GAVVRLVCGR AP
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