Gene Synpcc7942_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0702 
Symbol 
ID3775872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp693257 
End bp694045 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content58% 
IMG OID637799114 
Producthypothetical protein 
Protein accessionYP_399721 
Protein GI81299513 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00401534 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.259483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCC TGCTGACCTT ACTGACGGAT TTTGGGTCGC AGGACAGTTA CGTGGGGGCG 
ATGAAAGGGG TGATTTATTC CCTCTGCCCG CAGGCAACCC TAGTTGATTT GTGTCATGAA
GTTCCAGCAC AGGATGTGGC GGCAGGGCGT TGGCAGTTAT TGCAAGCCGT GCCCTACTTC
CCAGCCGGCA GCGTGCACCT GGCTGTTGTG GATCCGGACG TGGGTAGTGA TCGCCGCGCT
GTGGTCATTG AAACCGCGAT CGGCCTATTA ATTGGCCCTG ACAATGGCCT TTGGAGTGGC
GTCCTCAGTC GCTTTCCAGC ACAACGGGCA GTTAGCCTCA CTAACCCGAA CTACTGGCAA
TCGCCCCAGC CTGATCCGAC TTTCCATGGT CGCGACATTT TTGCACCGGT GGCCGCTCAT
TTGCTCAATG GCGTGCCGTT GACTGAGCTG GGGCCTCTGA TCGATCCCGC TTCCCTGCAG
ACTCTGATCG AGTCGCACCC GCAGCGATCG GATCAGGGTT GGCAGGGACA AATTCAGGCG
ATCGATCGCT TTGGCAACTT GATCACCAAT CTTCCAGCCG AACTGGGTCA AACAGCGGCA
GGTCTGATCT GGGGCGATCG CTGGTTGCCC TTGGCTCGGA CTTACAGCGA GGTTGCGATT
GGCGAGCTGC TGGTGCTGGC AGGGAGTCAT GGCTATTTGG AAATCGCCCA GCGTAACGGC
TCTGCGCAGC AGACTTTAGC AGCCAACATG GGCGCAGTCG TGCGATTGGT CTGTGGGCGG
GCACCCTAG
 
Protein sequence
MSRLLTLLTD FGSQDSYVGA MKGVIYSLCP QATLVDLCHE VPAQDVAAGR WQLLQAVPYF 
PAGSVHLAVV DPDVGSDRRA VVIETAIGLL IGPDNGLWSG VLSRFPAQRA VSLTNPNYWQ
SPQPDPTFHG RDIFAPVAAH LLNGVPLTEL GPLIDPASLQ TLIESHPQRS DQGWQGQIQA
IDRFGNLITN LPAELGQTAA GLIWGDRWLP LARTYSEVAI GELLVLAGSH GYLEIAQRNG
SAQQTLAANM GAVVRLVCGR AP