Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0701 |
Symbol | |
ID | 3775871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 692799 |
End bp | 693260 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799113 |
Product | hypothetical protein |
Protein accession | YP_399720 |
Protein GI | 81299512 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00299166 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.252492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTG ACATAAATCT TGAAAATGTA GCACCGCCTT GGTTTGACTA TCCCTTGCGG GTCCAGCCCC ATCACACCGA CTATGCAGGC ATTGTCTGGC ATGGCACCTA TCTGGCTTGG CTAGAAGAGG CGCGAGTGGA ATGTCTGCGA TCGGTGGGCG TCGCCTTCTC AGATTTGGTG GCCTTGGGCG TCGATTTACC CGTAGTAGAT CTTGGGGTTC GCTATCGCCG TGCGATCGCC CTCGGTGAGT CTGTGCTGGT GCGGGTGCGC ACGGGCCCGA GTCAAGGTGT GCGGCTGGTC TGGGATTGTC AGATCTGTCT GTCGCCCGAC CAAGTTTGCG CTACAGCACA GGTGATTTTG GCTCCCGTCG ATCGCCAACG GGGACGAATT CTTCGGCAGC TCCCTGAACC ATTAGAGGCC GCGATCGCGC GACTCCAAGC AGGGCAGTAC AGTCCCGAAT GA
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Protein sequence | MSADINLENV APPWFDYPLR VQPHHTDYAG IVWHGTYLAW LEEARVECLR SVGVAFSDLV ALGVDLPVVD LGVRYRRAIA LGESVLVRVR TGPSQGVRLV WDCQICLSPD QVCATAQVIL APVDRQRGRI LRQLPEPLEA AIARLQAGQY SPE
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