Gene Synpcc7942_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0692 
Symbol 
ID3775862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand- 
Start bp685631 
End bp686185 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content59% 
IMG OID637799104 
Producthypothetical protein 
Protein accessionYP_399711 
Protein GI81299503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.1442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.56084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAT CACTGCGCTG GGCATTGGGC CTCTGGGTCA GCTTGGGATT CACACCTGTC 
CAAGCCTTAG AGACAGTCAC CTTCTCAGCG GATGGACAAG TGCAGCAACT GGCGATTGCC 
GATCTCGCAG TTCTGGCGCA ACAGGGGCAA GCCTCCAGCG ATCTCTCACG GCTGCTTCAA 
CAAGCCGGGC TGAACAGCCA AGCCGTACGA CGCTTCTTAA ATTCCCCTCT GCCCTTATCT 
GGCAGCCAAT TATCGGCACT CCTCGACCTC GGTTTTGGCG ATCGCCTCGT GCAGGAGCTG 
AGTCGGACCT TGGGTGCCCA AGCAGAACAA CTGCAGAACC CCACCCGCAT CAATAATCGC 
CTCGCCCAGC TCGCCAGCCA GCCTAGGATT TCGGTGCTGC AACTGCTGGA AGTGTTGCCG 
GCCCAAAGCC TCGCAATCGA AATCCCGCGG CTGCTCAAAG TGCTGCTGCC CTTGCAAACC 
CAGTTCCGCA GCCTCGGGTT AGACCTTGCC GATGTGGTGC CCTGCCTCAG CGATCGCAGT 
TGTAGCAGCC GCTAA
 
Protein sequence
MNRSLRWALG LWVSLGFTPV QALETVTFSA DGQVQQLAIA DLAVLAQQGQ ASSDLSRLLQ 
QAGLNSQAVR RFLNSPLPLS GSQLSALLDL GFGDRLVQEL SRTLGAQAEQ LQNPTRINNR 
LAQLASQPRI SVLQLLEVLP AQSLAIEIPR LLKVLLPLQT QFRSLGLDLA DVVPCLSDRS 
CSSR