Gene Synpcc7942_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0682 
Symbol 
ID3775665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp675946 
End bp676905 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content57% 
IMG OID637799094 
Producthypothetical protein 
Protein accessionYP_399701 
Protein GI81299493 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTT TGGCCCTGGT TCCGGGCGGT ATCGGTGACC AGATTCTCTT CTTCCCGACG 
GTCGCCGATC TCAAAAAGTA CTATCCGCAG GCTCAGATTG ATGTCGTCGT TGAGCCTCGC
GCCGTGGGTG CTTATCGGGT CTGCGCCGAG GTAGACCAAG TCTTTCCGTT CGATTTCAAA
GATCGCAACA GCTTGGCCGA CTGGGGCAAT TTGCTCGGCT CCATTCGCGA GCGGGAATAC
GAAGCGGTGC TCTCCCTTGG CCAGCGATCG CTGGTGGGTC TCTTCCTCTG GTTGACCGGC
ATTCCCAAAC GGGTGGGCTA TGCGGGTCGC GGCAAAATTT TTCTCACGGA TGCGGTGCCG
CTCAACCGTG AACAGTATGC GGGAGCGCTC TACCACGATC TCTTGCAAGG CTTTGGTATT
AATACTCCCT GCCCGAATCC TAAGCTGACG TTGGCTCGGC AAGATTTGGA TTGGGCAACG
GCAGAACAGC AACGATTGGG GCTGGCAGGC CAGGGTTACC TCGTCCTGCA CGGCGGTTCG
AGCACGCTGG CCAAGCTCAA GGGTTTGCAG AAGGTCTATC CCGTTGAGAA ATGGGCGATC
GTGTTGCGAT CGATTCGCGA ACAGCGTCCT AGCCTGCCTT TTGTGGTGGT GCAAGGCCCC
GACGATGCGG AGTTTGTAGC GGAACTGCGC AAATCCAATC TCGACTTCCA AGTGGTGCAG
CCGCCAGACA TCGGCAAACT TGCTGCGATC ATTGCTGGAG CTGATCTGAT GCTCTGTACC
GATAGTGCAC CGATGCATTT AGCCGTGGCG AGCGGGACAA GGACGATCGC CCTGTTTGGT
CCCTTTGAAC CGGCAAAGCT GCTGCCAGCA GATGATCGGT TCATCGGCAT CAAGGCGCAG
GGTGTTGACG TGGCGACGAT TCCACCCCAG GAAATCATCG ATCGCCTCTT CGGTCGCTAG
 
Protein sequence
MRILALVPGG IGDQILFFPT VADLKKYYPQ AQIDVVVEPR AVGAYRVCAE VDQVFPFDFK 
DRNSLADWGN LLGSIREREY EAVLSLGQRS LVGLFLWLTG IPKRVGYAGR GKIFLTDAVP
LNREQYAGAL YHDLLQGFGI NTPCPNPKLT LARQDLDWAT AEQQRLGLAG QGYLVLHGGS
STLAKLKGLQ KVYPVEKWAI VLRSIREQRP SLPFVVVQGP DDAEFVAELR KSNLDFQVVQ
PPDIGKLAAI IAGADLMLCT DSAPMHLAVA SGTRTIALFG PFEPAKLLPA DDRFIGIKAQ
GVDVATIPPQ EIIDRLFGR