Gene Synpcc7942_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0676 
Symbol 
ID3775659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp670914 
End bp672119 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content57% 
IMG OID637799088 
Producthypothetical protein 
Protein accessionYP_399695 
Protein GI81299487 
COG category[S] Function unknown 
COG ID[COG4370] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03492] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.504662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC TGCTTTTCCT CAGCAATGGC CACGGTGAAG ATCTCAACGC CAGCTTGATC 
GTGAAGGCGA TTCAAACGGT TAATCCCCAG TTGGCGATCG CGGCGCAACC AATCGTCGGT
GCGGGTCATG CCTATCGCAA GCTGGGCGTT CCGATCATTG GCCCCACTGA GTCAATGCCT
TCGGGTGGTT TGCTCTACAT GAATCCGTGG GTATTGGTGC GGGATCTCGC CCAGGGACTC
GTGCTGCTCA GTCTGCGGCA AATTGCAGCC ATTTGGCGAT TGCGCCAGCA GTTCAAACTG
GTTGTGGCCG TTGGGGATGT GGTGCCGATC GCGCTGGCCA GTCTGACGGG CCGTCCCTTT
GTTGCTTTTC TAGTCTCGAC TTCTAGCTAC TACGAAGGAC GATTGCGGCT GCCTTGGCTG
ACACAGCGAC TGTTGCGATC GCCTCGCTGT CGGCAGATTT TCTGTCGTGA TGCGTTTACG
GCAGCGGATT TACAGAGCCG AGGCTTTGCC AAAGCCATTT TCTGTGGCTA TCCGATCATG
GATGCTTTGC AGGGACAGGG GGCTGAGCTG GTGCTGGATC CGCAATGTCC CTTGATTGCC
CTGCTGGCAG GTAGTCGTCT CCCGGAAGCG ATCGCCAATC TCAAGCTCCA GCTCCGACTC
TGTCAGGAAT TAGCCAAATG GGGTGACTTT GCCTTTGCAG CTGCGATCGT GCCTGCAATC
GATGCCACTC AACTCCAGGC GATTGCTATG GATCTCGGTT GGCAGTTTGA TGGCCGCGAT
CGCCTCTTAA CTTCCGTGGG CGATCGCCGT TTGGAGGTTC ACTGTCGGAG CGATGCCTTT
GCCGAAATTT TGCAAGCCAG TCAGCTGGTG ATCGGCATGG CTGGTACCGC AGTTGAGCAG
GCCGTTGGCC TAGGTAAACC TGTGGTCCAA CTGATTGGCG CTGGCCCGCA GTTTACTTAT
CGCTTTGCTG AAGCCCAAGA GCGGCTCCTC GGAACAGATT CAGTGCAGAC GATTGGCAAA
ACTCCCGCTC AGCCTGCCGA TCTGACCCAA GCGGCTCAAG TCATTCTCCA GACTCTGCAG
GATCCTACCC AACCCGAGCG CTGTCGACAG AATGGGCAAG CGCGAGTGGG CTCCCCAGGT
GGTTCCGCCG CGATCGCGGG TCAGATTTTC AGCGTGCTTC GACAGGGATC AATTGACGAT
CGGTAG
 
Protein sequence
MPDLLFLSNG HGEDLNASLI VKAIQTVNPQ LAIAAQPIVG AGHAYRKLGV PIIGPTESMP 
SGGLLYMNPW VLVRDLAQGL VLLSLRQIAA IWRLRQQFKL VVAVGDVVPI ALASLTGRPF
VAFLVSTSSY YEGRLRLPWL TQRLLRSPRC RQIFCRDAFT AADLQSRGFA KAIFCGYPIM
DALQGQGAEL VLDPQCPLIA LLAGSRLPEA IANLKLQLRL CQELAKWGDF AFAAAIVPAI
DATQLQAIAM DLGWQFDGRD RLLTSVGDRR LEVHCRSDAF AEILQASQLV IGMAGTAVEQ
AVGLGKPVVQ LIGAGPQFTY RFAEAQERLL GTDSVQTIGK TPAQPADLTQ AAQVILQTLQ
DPTQPERCRQ NGQARVGSPG GSAAIAGQIF SVLRQGSIDD R