Gene Synpcc7942_0671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0671 
Symbol 
ID3775654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp666156 
End bp666653 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID637799083 
Producthypothetical protein 
Protein accessionYP_399690 
Protein GI81299482 
COG category[S] Function unknown 
COG ID[COG2426] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0912535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTAG AGCGCCCCTG GTCGGAATTG CTGGTGATGC TGATGGGGGC AACGCCGCTG 
ATCGAACTCC GGGGTGCTAT TCCATTGGGT TTAGCGCTCA ACCTCAACCT TGGCACCTCG
CTGATCTTTG CTCTGATTGG CAACAGCTTA GTTATTCCGA TCGTGCTGCT GTTGCTGCCT
CGGATCATTC AGTGGTGTGA AGGCTGGCCG CCCTTTGAGC GGTTTTGGGA AGCCTTGGAG
CGGCGGGTGC GGCTCAAGGG TGAAGCCACG GTGCAGCGTT ACGGTGCGAT CGGGCTGGGA
ATTTTTGTCG CGATTCCGTT GCCAGGAACA GGTGCCTGGG CTGGTGCAGC CTTGGCGGTC
ATTTTGGGGA TTCGCCGACG CTATGCCCTG CCCTCCATTG GCTTCGGGGT GCTGACCGCT
GGCATCTTGG TGGCGCTGAT TGCAGGCGGA GTTCTGGCCG GATTTCAGGG CTTGGTACTG
AAGGAGATCT CACTGTAG
 
Protein sequence
MMLERPWSEL LVMLMGATPL IELRGAIPLG LALNLNLGTS LIFALIGNSL VIPIVLLLLP 
RIIQWCEGWP PFERFWEALE RRVRLKGEAT VQRYGAIGLG IFVAIPLPGT GAWAGAALAV
ILGIRRRYAL PSIGFGVLTA GILVALIAGG VLAGFQGLVL KEISL