| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0655 |
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| Symbol | |
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| ID | 3775638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 650232 |
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| End bp | 651290 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799067 |
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| Product | photosystem II D2 protein (photosystem q(a) protein) |
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| Protein accession | YP_399674 |
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| Protein GI | 81299466 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTG CAGTAGGGCG AGCGCCAGCG GAGCGGGGAT GGTTTGACGT CCTCGACGAC
TGGCTGAAGC GCGACCGATT TGTATTTGTG GGTTGGTCAG GGTTGCTGCT GTTTCCCTGT
GCGTATTTAG CACTGGGCGG GTGGTTGACC GGGACCAGCT TTGTGACGTC GTGGTACACC
CACGGCATCG CGTCTTCGTA CTTAGAAGGC GGCAACTTTT TGACCGTAGC AGTGAGCACC
CCAGCGGATG CGTTTGGGCA TTCGTTGATG CTGCTGTGGG GCCCCGAGGC ACAAGGGAAC
TTCGTGCGTT GGTGCCAGTT GGGTGGCTTG TGGAACTTCG TAGCACTGCA CGGCGCCTTC
GGCCTGATTG GGTTCATGCT GCGTCAATTT GAGATTGCGC GGTTGGTGGG CGTCCGTCCG
TACAACGCGA TCGCCTTTTC GGGTCCGATC GCAGTGTTCG TGTCGGTGTT CTTGATGTAC
CCGTTGGGTC AATCGAGCTG GTTCTTCGCT CCGAGCTTTG GCGTGGCAGC GATTTTCCGG
TTTTTGTTGT TCCTGCAAGG GTTCCACAAC TGGACCTTGA ACCCATTCCA CATGATGGGC
GTGGCCGGGA TTTTGGGTGG GGCATTGCTG TGCGCCATTC ACGGTGCGAC GGTGGAGAAC
ACCCTGTTCG AGGATTCAGA GCAATCGAAC ACCTTCCGGG CATTTGAGCC GACGCAGGCC
GAAGAGACGT ACTCGATGGT GACGGCGAAC CGTTTTTGGA GCCAGATTTT CGGGATTGCG
TTTTCGAACA AGCGGTGGCT GCACTTTTTC ATGCTGTTCG TGCCGGTGAC GGGCTTGTGG
ATGAGCTCGA TCGGGATTGT AGGTTTGGCG TTGAACCTGC GGGCGTACGA CTTCGTGTCG
CAGGAGCTGC GGGCCGCTGA GGATCCGGAA TTTGAGACGT TCTACACGAA GAACATCTTG
TTGAACGAAG GGATTCGGGC CTGGATGGCA CCGCAAGACC AACCGCACGA AAAATTCGTC
TTCCCCGAAG AGGTTCTGCC CCGTGGTAAC GCTCTCTAG
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| Protein sequence | MTIAVGRAPA ERGWFDVLDD WLKRDRFVFV GWSGLLLFPC AYLALGGWLT GTSFVTSWYT
HGIASSYLEG GNFLTVAVST PADAFGHSLM LLWGPEAQGN FVRWCQLGGL WNFVALHGAF
GLIGFMLRQF EIARLVGVRP YNAIAFSGPI AVFVSVFLMY PLGQSSWFFA PSFGVAAIFR
FLLFLQGFHN WTLNPFHMMG VAGILGGALL CAIHGATVEN TLFEDSEQSN TFRAFEPTQA
EETYSMVTAN RFWSQIFGIA FSNKRWLHFF MLFVPVTGLW MSSIGIVGLA LNLRAYDFVS
QELRAAEDPE FETFYTKNIL LNEGIRAWMA PQDQPHEKFV FPEEVLPRGN AL
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