Gene Synpcc7942_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0652 
Symbol 
ID3775635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp647124 
End bp648713 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content59% 
IMG OID637799064 
Producthypothetical protein 
Protein accessionYP_399671 
Protein GI81299463 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGGT CAGCCCTGCG TTCTGTCTTG AATCAGTTGC CGGCCAGAGT GGCACAAGGG 
CTGCACCAGA GTGATGCTTT CTGGCGATCG CTGCGTTGGG GGCAACTGCC GACACCGCAG
TGGGTCAGCG AATCGGCTGA TCCGCTCGGC TCCTGCGATC TGGATGTCCT CGTCGCGGGA
GGTACCTTGG GGCTTTTGCC TGCACTGGGC CTGCAGCGTC AGGGGTGGCG TGTTGGCCTC
TGGGAACGCG GCATGGTCCA GGGGCGTGAT CAGGAATGGA ATATTTCGCG GCATGAGCTG
GCCGTTTTGG TTGAGCTGGA ACTACTGACA GCGGAGGAGC TCGAAGCGGC GATCGCGACA
GAATTTCCAG CAGCCCGCAT CGCTTTTCCC GGTAGCGCCG AGTTGTGGGT CGAAGGCATC
CTCAACATTG GTATTTCTCC ACGACGCCTG ATTGCGACGC TGCTTCAGCA TTTTCGTGAG
CAAGGCGGGC AAGTCTTCGA ACAGACCGCG ATCGATCGCG TCAGTGTCCA TCCCGATGGG
GTTGTCATTG GGGCAGGGTC ACAGCGTTGG TCGGGGCGGC TGCTCCTAGA TGCCTTGGGG
CACTTTTCAC CGATCGCGCG TCAAGCTCGA GCGGGTGCAA AACCCGATGC CATTTGCCTC
GTTGTTGGTG GCTGTGCCCA GGGCTTCCCC GCCAGCGATC GCGGCGATTT GTTTGTTTCG
CGATCGCCCA TCCAACAACA GCGCCAGTCC TTTTGGGAAG CTTTTCCAGC AGCAGAGGGT
CGCACCGCTT ATCTCTTTAC CTATATCGAC GCCCAGCCAG CTCGTCCGAG TCTGCGATCG
CTGCTAGAGG AGTATCTAGC GGCCTTGCCG GAGTACCAGG GCGTGGATTT GCAACAGTTG
CAGTGGAAAC GCCTGTTGTG GGGAATTCTC CCTAGCTATC GCCAAAGCCC TCTCCAAAGT
CCTTGGAATC GGATTCTCGC GATCGGCGAC AGCAGTAGCG CCCAGTCTCC CCTTAGTTTT
GGCGGTTTTG GCGCATTGTT GCGGCATTTG GAGCGACTCT GCCGTGGCAT CCACGAAGCA
CTGCTCGCTG ATTGCCTGCA AGCTGCCGAT CTAGCGCTGT TACAACCCCA TCAGCCCAAC
TTGGCTGTGA CCTGGCTGTT TCAGCAGAGT ATGACGGTGC CCCTCGATCG CTCCTTGCCC
CCAGAACGGA TCAACGAGCT ACTGGGGCGA ATCTTCGCCG TGATGGAGAG CTTGGGTCCC
CAGACCCTCC GTCCTTTCCT GCAGGATGTG GTGCAGTTTC AGCCCTTGGC CAAAACCCTG
TTGATGACGA CGCTGCTTCA TCCAGTCTTG GTGGCAAAAC TGTTGCCGCA GCTGGGACTT
CAACCCTTGC TGCAGTGGCT GCCGCAATTT TTGCAGCTTA GTCTCTATCG ATCACTCGCG
ATCGCTGGCG AACCCACAGA CTGGCTCAAA GTCTGCGATC GCGATCGCTT CCGCCAGCGC
CGCCGCCAAG AGGCCTGGTT CTACGGATCG GGCTGCGACT ATGCTGCCCC CCTCAAAAGC
TCAGTGGATC GACATCGATC AATAAATTGA
 
Protein sequence
MSGSALRSVL NQLPARVAQG LHQSDAFWRS LRWGQLPTPQ WVSESADPLG SCDLDVLVAG 
GTLGLLPALG LQRQGWRVGL WERGMVQGRD QEWNISRHEL AVLVELELLT AEELEAAIAT
EFPAARIAFP GSAELWVEGI LNIGISPRRL IATLLQHFRE QGGQVFEQTA IDRVSVHPDG
VVIGAGSQRW SGRLLLDALG HFSPIARQAR AGAKPDAICL VVGGCAQGFP ASDRGDLFVS
RSPIQQQRQS FWEAFPAAEG RTAYLFTYID AQPARPSLRS LLEEYLAALP EYQGVDLQQL
QWKRLLWGIL PSYRQSPLQS PWNRILAIGD SSSAQSPLSF GGFGALLRHL ERLCRGIHEA
LLADCLQAAD LALLQPHQPN LAVTWLFQQS MTVPLDRSLP PERINELLGR IFAVMESLGP
QTLRPFLQDV VQFQPLAKTL LMTTLLHPVL VAKLLPQLGL QPLLQWLPQF LQLSLYRSLA
IAGEPTDWLK VCDRDRFRQR RRQEAWFYGS GCDYAAPLKS SVDRHRSIN