Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0652 |
Symbol | |
ID | 3775635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 647124 |
End bp | 648713 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637799064 |
Product | hypothetical protein |
Protein accession | YP_399671 |
Protein GI | 81299463 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGGT CAGCCCTGCG TTCTGTCTTG AATCAGTTGC CGGCCAGAGT GGCACAAGGG CTGCACCAGA GTGATGCTTT CTGGCGATCG CTGCGTTGGG GGCAACTGCC GACACCGCAG TGGGTCAGCG AATCGGCTGA TCCGCTCGGC TCCTGCGATC TGGATGTCCT CGTCGCGGGA GGTACCTTGG GGCTTTTGCC TGCACTGGGC CTGCAGCGTC AGGGGTGGCG TGTTGGCCTC TGGGAACGCG GCATGGTCCA GGGGCGTGAT CAGGAATGGA ATATTTCGCG GCATGAGCTG GCCGTTTTGG TTGAGCTGGA ACTACTGACA GCGGAGGAGC TCGAAGCGGC GATCGCGACA GAATTTCCAG CAGCCCGCAT CGCTTTTCCC GGTAGCGCCG AGTTGTGGGT CGAAGGCATC CTCAACATTG GTATTTCTCC ACGACGCCTG ATTGCGACGC TGCTTCAGCA TTTTCGTGAG CAAGGCGGGC AAGTCTTCGA ACAGACCGCG ATCGATCGCG TCAGTGTCCA TCCCGATGGG GTTGTCATTG GGGCAGGGTC ACAGCGTTGG TCGGGGCGGC TGCTCCTAGA TGCCTTGGGG CACTTTTCAC CGATCGCGCG TCAAGCTCGA GCGGGTGCAA AACCCGATGC CATTTGCCTC GTTGTTGGTG GCTGTGCCCA GGGCTTCCCC GCCAGCGATC GCGGCGATTT GTTTGTTTCG CGATCGCCCA TCCAACAACA GCGCCAGTCC TTTTGGGAAG CTTTTCCAGC AGCAGAGGGT CGCACCGCTT ATCTCTTTAC CTATATCGAC GCCCAGCCAG CTCGTCCGAG TCTGCGATCG CTGCTAGAGG AGTATCTAGC GGCCTTGCCG GAGTACCAGG GCGTGGATTT GCAACAGTTG CAGTGGAAAC GCCTGTTGTG GGGAATTCTC CCTAGCTATC GCCAAAGCCC TCTCCAAAGT CCTTGGAATC GGATTCTCGC GATCGGCGAC AGCAGTAGCG CCCAGTCTCC CCTTAGTTTT GGCGGTTTTG GCGCATTGTT GCGGCATTTG GAGCGACTCT GCCGTGGCAT CCACGAAGCA CTGCTCGCTG ATTGCCTGCA AGCTGCCGAT CTAGCGCTGT TACAACCCCA TCAGCCCAAC TTGGCTGTGA CCTGGCTGTT TCAGCAGAGT ATGACGGTGC CCCTCGATCG CTCCTTGCCC CCAGAACGGA TCAACGAGCT ACTGGGGCGA ATCTTCGCCG TGATGGAGAG CTTGGGTCCC CAGACCCTCC GTCCTTTCCT GCAGGATGTG GTGCAGTTTC AGCCCTTGGC CAAAACCCTG TTGATGACGA CGCTGCTTCA TCCAGTCTTG GTGGCAAAAC TGTTGCCGCA GCTGGGACTT CAACCCTTGC TGCAGTGGCT GCCGCAATTT TTGCAGCTTA GTCTCTATCG ATCACTCGCG ATCGCTGGCG AACCCACAGA CTGGCTCAAA GTCTGCGATC GCGATCGCTT CCGCCAGCGC CGCCGCCAAG AGGCCTGGTT CTACGGATCG GGCTGCGACT ATGCTGCCCC CCTCAAAAGC TCAGTGGATC GACATCGATC AATAAATTGA
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Protein sequence | MSGSALRSVL NQLPARVAQG LHQSDAFWRS LRWGQLPTPQ WVSESADPLG SCDLDVLVAG GTLGLLPALG LQRQGWRVGL WERGMVQGRD QEWNISRHEL AVLVELELLT AEELEAAIAT EFPAARIAFP GSAELWVEGI LNIGISPRRL IATLLQHFRE QGGQVFEQTA IDRVSVHPDG VVIGAGSQRW SGRLLLDALG HFSPIARQAR AGAKPDAICL VVGGCAQGFP ASDRGDLFVS RSPIQQQRQS FWEAFPAAEG RTAYLFTYID AQPARPSLRS LLEEYLAALP EYQGVDLQQL QWKRLLWGIL PSYRQSPLQS PWNRILAIGD SSSAQSPLSF GGFGALLRHL ERLCRGIHEA LLADCLQAAD LALLQPHQPN LAVTWLFQQS MTVPLDRSLP PERINELLGR IFAVMESLGP QTLRPFLQDV VQFQPLAKTL LMTTLLHPVL VAKLLPQLGL QPLLQWLPQF LQLSLYRSLA IAGEPTDWLK VCDRDRFRQR RRQEAWFYGS GCDYAAPLKS SVDRHRSIN
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