| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0651 |
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| Symbol | |
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| ID | 3775634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 644741 |
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| End bp | 647161 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799063 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_399670 |
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| Protein GI | 81299462 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCATC CTGGATTACC CCAAGCCTGG GCAGAGGTTC TAGTCGATTG CCCTGGGCTA
GAAACCCCCT ATACCTACGA GGCTAGCCCT GCGATCGCAG TGGGTGACGT AGTTTTGGTG
CCCTTTGGCG ATCGATTGGT GGGTGGCTTG GTAGTGCGGA TAGTCAGCGA GTTGGCGGCC
GAATTGGACG CTACGCGGAT TCGTCCAATC CACGAGGTCG TAGCGCAGAG CTTTTTTCAG
CCCCATTATT GGGCGCTGCT GGAACAGACC GCCAGCTACT ATCAGGTCTC CCTGACCCAA
GTGCTGCGGG TTGCGCTACC CCCGGGGCTG TTGCGGCGAT CGCAACGCCG AATTCGGGCT
CGATCGGGTA CCCAACCAAT CTTGCGATCG GGGGCCGCTC AGAGACTGTG GCCGCTACTG
CAGAAAAATC TTGAGACGGG CTATAGCTGG CGCTATCTCT GTCAGCAACA TCCTCAGGCT
TCTCAAGGAT TGCGCGAACT CCTGCAAACG GGCTGTGTCG AGAGCTACAT CTGCCTCGGC
AAGAGCACTC AAGCGAAGCA GCAACTCGCG ATTACCTTAG TTCAGCCGCG ATCGCCTCAC
TTAACCGATC GCCAGGCGGC GGTCCTTGCA CAGCTTCAAC AACTGGGGGG TGAGGTTTGG
CTCCAATCCT TTCAAGAACA AACTGGCGCG AGTCGAGGCT TACTCGATCG CCTGTCGGTC
TTGGGTTGTG TGGCGATCAC TCCTAAGGAA CGACTGCGAA GTGGGCTGCA AACAACCGAC
TTGAGCGCGG ATCAGCCTCG CCAGCTGACA CCGGCTCAAG CCGCTGCCTT GGCTCAAATT
CAGCAGGCTG GCGCTGGTGA AACTTTGTTG CTCCACGGCG TTACCGGTTC CGGCAAAACC
GAGGTCTATC TGCAGGCGAT TGCGCCTCTC TTGGATCAGC AGCGATCGGT GCTGGTGCTG
GTCCCAGAAA TTGGCCTGAC GCCGCAACTG ACCGAGCGTT TTCAGCAGCG CTTTGGCGGC
GATCGCCTCT GCCTCTATCA CAGCGGCCTC TCGGATGGCG AACGCTACGA CGCTTGGCGT
CAGATGTTGT TGGGTGGTGC GCGGGTGGTG ATCGGAACGC GATCGGCGGT GTTTGCCCCC
CTACCCAATC TGGGCCTGAT CATTTTGGAT GAGGAGCACG ACAGCAGCTT TAAACAAGAG
CAGACTCCGC CCTGCTACCA CGCACGCCAG GTTGCCCACT GGCGATCGCA ATGGGAGGGT
TGTCCGCTCC TGCTGGGGTC TGCCACCCCA GATCTGGAAA CTTGGGCGGC CACGCAAGGT
GCTGAGGCTC AAACTCGCTA CCTAGCGCTG CCCGATCGGG TTGAGGCGCG AACGCTACCG
CCAGTTGAGA TTGTTGATCT GCGCCAAGAG CTAGCCAACG GTAACCGTTC AATCTTCAGC
ACGAAACTAC AGCAAGCCCT CGTTGACCTA CAAGCGCGGG GCGAGCAAGG CATCCTCTTT
ATCCATCGGC GGGGGCACAG CACCTTTGTT TCCTGTCGCG CCTGCGGCAC GCCGATCGGC
TGTCCTCACT GCGATGTCTC GCTCTCTTAC CACCTCGATC AGGTCCTCAA TCAGTCGCTG
CTGCGCTGCC ACTACTGCAA CTACACCCAA GCCCAGCCGC AACGTTGTCC GGCCTGTGAT
TCGCCCTATC TCAAAAACTT CGGTAGCGGT AGTCAGCGGG TGGAAGCCGA AGTCAAACGG
CTGTTTCCCG AACTCGCCGT CTATCGCTAC GACAGTGATA CGACACGCCA AAAAGGAGGC
CATCAAAAAG TGCTCGATCA ATTTCGATCG CAGCCCGCCA GTTTATTGGT GGGCACTCAA
ATGCTGACCA AGGGAATTGA TCTGCCAGAG GTGACGCTCG TTGGTGTGGT GGCGGCGGAC
GGGTTGCTGC ACATGCCCGA CTTTCGTGCT AGTGAGCGAT CGCTGCAGAC CCTAATCCAA
GTGGCGGGTC GAGCCGGTCG AGGCGATCGC CCCGGCCGTG TGATCGTCCA AACCTACTGC
CCCGATCACC CTGTGCTGAC ACATTTACTG GACCACAACT ATGCCCAGTT CCTGGGTGAA
GAGCTGCAGG AGCGGCAGGC CCATGGCTAT CCGCCGGCGC AGCGGCTGCT GCTCTTGAGC
TGTCGGGGCT TGGAAGAAGC AGTAGTGATG ACTGCAGCTG AGGCGATCGC GGACCGATTA
CACCCGATTC TGCCCGCTGG GGTTGAACTT CTGGGGCCTG CGCCGGCCAA TATTGCTCGA
ATCGCACGGC GTCATCGCTG GCAGCTGTTA CTTAAAGCAC CCCCCGAGAC CGATTGGCAG
TGGTTGCCAC TGACAGATCT ACGTGTCTGC TGCCCCAAAG GCGTCAATTT ATTGATCGAT
GTCGATCCAC TGAGCTTTTG A
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| Protein sequence | MRHPGLPQAW AEVLVDCPGL ETPYTYEASP AIAVGDVVLV PFGDRLVGGL VVRIVSELAA
ELDATRIRPI HEVVAQSFFQ PHYWALLEQT ASYYQVSLTQ VLRVALPPGL LRRSQRRIRA
RSGTQPILRS GAAQRLWPLL QKNLETGYSW RYLCQQHPQA SQGLRELLQT GCVESYICLG
KSTQAKQQLA ITLVQPRSPH LTDRQAAVLA QLQQLGGEVW LQSFQEQTGA SRGLLDRLSV
LGCVAITPKE RLRSGLQTTD LSADQPRQLT PAQAAALAQI QQAGAGETLL LHGVTGSGKT
EVYLQAIAPL LDQQRSVLVL VPEIGLTPQL TERFQQRFGG DRLCLYHSGL SDGERYDAWR
QMLLGGARVV IGTRSAVFAP LPNLGLIILD EEHDSSFKQE QTPPCYHARQ VAHWRSQWEG
CPLLLGSATP DLETWAATQG AEAQTRYLAL PDRVEARTLP PVEIVDLRQE LANGNRSIFS
TKLQQALVDL QARGEQGILF IHRRGHSTFV SCRACGTPIG CPHCDVSLSY HLDQVLNQSL
LRCHYCNYTQ AQPQRCPACD SPYLKNFGSG SQRVEAEVKR LFPELAVYRY DSDTTRQKGG
HQKVLDQFRS QPASLLVGTQ MLTKGIDLPE VTLVGVVAAD GLLHMPDFRA SERSLQTLIQ
VAGRAGRGDR PGRVIVQTYC PDHPVLTHLL DHNYAQFLGE ELQERQAHGY PPAQRLLLLS
CRGLEEAVVM TAAEAIADRL HPILPAGVEL LGPAPANIAR IARRHRWQLL LKAPPETDWQ
WLPLTDLRVC CPKGVNLLID VDPLSF
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