Gene Synpcc7942_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0642 
Symbol 
ID3775625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp636125 
End bp636670 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content59% 
IMG OID637799054 
Productbacterioferritin comigratory protein 
Protein accessionYP_399661 
Protein GI81299453 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTCA GTCGTCGCCA ATTACTCCTC AGCTCACTTT TGGCTTTGCC AGCCCTCGTT 
TTGGCTCCGC GATCGGCCCA AGCCTTAGGT GGCCCTCAGC CGCCCGTGGA TGAGCCCGCC
CCGGACTTTT CCTTGCCCAC CGACGATGGC CGCGAGCGTC TATCCCTCGC TGACTTCCGG
GGACAGTGGC TGGTGCTCTA CTTCTATCCC AAGGATGGAA CCCCCGGCTG CACCCTCGAA
GCCCAGCGTT TTCAACAGGA TCTGGCTGCC TATGCTGAAC GCAATGCCCA AATCGTCGGG
GTCAGTGCCG ATGATCTCAG TAGCCACAGT CGCTTCCGAG AAAACGAGGG ACTGTCCTAC
CCCCTGTTGG CTGACGTCAA AGGCGAGGTC AGCAAACGCT ATGGCTCTTG GCTAGCTCCT
TTCAGCCTGC GCCACACCTA CATCATCGAT CCAGAAGGGG TGCTGCGCGC TAACTTCACC
GCAGTGCGGC CGGTGATTCA TAGCAAAGAA GTGCTGGCCA AATTGGATGA GTTGCAAGCG
GGGTAG
 
Protein sequence
MPVSRRQLLL SSLLALPALV LAPRSAQALG GPQPPVDEPA PDFSLPTDDG RERLSLADFR 
GQWLVLYFYP KDGTPGCTLE AQRFQQDLAA YAERNAQIVG VSADDLSSHS RFRENEGLSY
PLLADVKGEV SKRYGSWLAP FSLRHTYIID PEGVLRANFT AVRPVIHSKE VLAKLDELQA
G