| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0628 |
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| Symbol | |
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| ID | 3775611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 621277 |
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| End bp | 622137 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799040 |
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| Product | spermidine synthase |
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| Protein accession | YP_399647 |
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| Protein GI | 81299439 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.414724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.905176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCTG ACGCACCCGT TTGGATTGAC GAAGTCTTTG AAGATCGCGT TCGCTACGGT
CTGCGGGGGC AAATCCTCTG GGAAGAAACC AGTCCCTTTC AAAAAATCAC GATCGTCGAT
ACCGAGCACT ACGGACGGGG TTTGCTGCTC GACGACTGCT GGATGACGGC TGAGCGCTGT
GAGGTTTGCT ACCACGAATA TCTCGTCCAT CCACCCCTGA CGACGGCTGC CAGCATTGCG
CGCGTGCTCG TGATTGGTGG TGGCGATGGT GGCACCGTCC GTGAAGTTTT GCGCTATGCC
GAGGTTGAGC AAGTCGATCT CGTCGAAATT GATGGCCGCG TCGTCGAGTT GTCTCAGGAA
TATTTGGGGG CGATCGGCAC TGCTTGGGCA GACCCGCGCC TCAACGTCAA AATTGGCGAT
GGCATCGCCT TTGTCCAGAC TGCGCCCGAC GCCAGCTACG ACGTTATTCT CGTCGATGGC
TCCGATCCGG CCGGCCCTGC TGCTGGTCTG TTTAACCGCG AGTTCTACGA AAATTGCCGC
CGCGTCCTTA AACCGGGTGG GGTCTTTGCC AGCCAAGCCG AGTCGCCCGA TAGCTTCCTC
GCGGTTCACC TGGAGATGAT TGAAACGCTC TCAGCCGTGT TCGCTGAGGC GAAGCCCTAC
TACGGCTGGG TGCCGATGTA TCCGAGCGGC TGGTGGAGCT GGCTCTACGC TAGTGATACG
CCGGGACAAT TCCAGAAACC TCAGAGCGAT CGCCTTGCTG CGATTGAGCC GCAAGTCGAA
ATTTACAATC GCGACATTCA TCAAGCGGCT TTTGCCCAGC CTAATTTCGT TCGTCGGGGT
CTGAGCGCTC GTCAAGGCTA A
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| Protein sequence | MSADAPVWID EVFEDRVRYG LRGQILWEET SPFQKITIVD TEHYGRGLLL DDCWMTAERC
EVCYHEYLVH PPLTTAASIA RVLVIGGGDG GTVREVLRYA EVEQVDLVEI DGRVVELSQE
YLGAIGTAWA DPRLNVKIGD GIAFVQTAPD ASYDVILVDG SDPAGPAAGL FNREFYENCR
RVLKPGGVFA SQAESPDSFL AVHLEMIETL SAVFAEAKPY YGWVPMYPSG WWSWLYASDT
PGQFQKPQSD RLAAIEPQVE IYNRDIHQAA FAQPNFVRRG LSARQG
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