Gene Synpcc7942_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0627 
Symbol 
ID3775610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp620462 
End bp621226 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content57% 
IMG OID637799039 
Producthypothetical protein 
Protein accessionYP_399646 
Protein GI81299438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.131401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCC TTCTCGCCCT AGATTTCGAT GGCGTTTTGT GTGATGGCTT GCGCGAATAT 
TTCCTCGCGG CTTGGCAGGC GGGCTGCGAT CGCGATCCCA GTTGGCCGGA AGTGCCTGAG
CCGAGTCTAG AAGATCGCTT TCGGTTGCTA CGGCCCGTGA TTGAGCAGGG TTGGGAGATG
CCCGTGCTGC TGCAAGCCTT ACGGAGGGAA GTTGCAGATG CAGAGGTGTT GGCAGACTGG
CCTCAGCTCT GCGATCGCGT CTTGAAAGAC TGGGGCCTAA CCACCACAGA ACTCTCTCAA
GCAATGGATC GGGTTCGCGA TCGCTGGATT AAGCGCGATC GCAAGGAGTG GCTGCAACTG
CATCACTTTT ACCCCGGCGT GGCGGAGCGT TTGGCCCAGC AGACCGCACC TTGGGTGATC
ATCTCCACCA AAGATGGCCG CTTTATCGCC GAGTTACTGG AACAGATTCC AAATCTTCAG
CCGCCTTTGG CGATCTACGG CAAGGAAGTT GGCGTCCCCA AGACTCAAAC CCTGATTCAA
CTGCAAGTGG AGTTTGAGCA AATTGCTTTT GTCGAAGACC GCTTACCGGC CCTGGAAGCG
GCTGCCCAGC TCGAAAGCGT TGATCTTTAC CTCGCGGATT GGGGCTACAA CACCGATCGC
GATCGCCAAC AAGCGATGAC GAGCGATCGC ATTCAATTGC TCCGGTTGAC CGACTTCAGC
AGCGGGCGAT CGCCCGCGTT GGCTGCATCA CCCGTCGAGT CATAA
 
Protein sequence
MASLLALDFD GVLCDGLREY FLAAWQAGCD RDPSWPEVPE PSLEDRFRLL RPVIEQGWEM 
PVLLQALRRE VADAEVLADW PQLCDRVLKD WGLTTTELSQ AMDRVRDRWI KRDRKEWLQL
HHFYPGVAER LAQQTAPWVI ISTKDGRFIA ELLEQIPNLQ PPLAIYGKEV GVPKTQTLIQ
LQVEFEQIAF VEDRLPALEA AAQLESVDLY LADWGYNTDR DRQQAMTSDR IQLLRLTDFS
SGRSPALAAS PVES