Gene Synpcc7942_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0619 
Symbol 
ID3775601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp609153 
End bp609788 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content58% 
IMG OID637799030 
Producthypothetical protein 
Protein accessionYP_399638 
Protein GI81299430 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.512378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.260875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCGCT GGATCGATAT GACGATGGAC AGATTGGGGT ATTGGGGCAT CGGTCTGCTG 
ATGTTTCTCG AAAACCTCTT TCCCCCGATC CCGTCGGAAC TGATCATGCC TTTGGCCGGC
TATTCCGCTG CTCAAGGTCA ATTGGCTTTA TTCCCTGCGA TCGTGGCCGG TGTCGTCGGC
ACAATGGTGG GGGCTTTGCC TTGGTATTAC CTCGGCCGCT GGCTGGGTGA AGACCGGATT
CTGCTCTGGC TGGAGCGCCA TGGCCGCTGG CTGGGCATCC GCCCTCATGA ACTACAGCGA
TCGCGGCGTT GGTTTAACCG TCATGGTCGC AAAGTCGTGT TCTGGGGGCG GTTGATTCCT
GGCATTCGTA CCTTGATCTC GCTGCCCGCT GGCTTCGAGC GGATGCGGTT GCGGGAGTTT
TTGATCTATT CCACCCTCGG TACCACGATT TGGGTGCTGT TGCTGACGCT GGCCGGCTAC
AAACTTCGGC GTAACTTTGC CCTTGTCGAG CAGTGGTTAG CCCCGGTTTC CAAAGGAGTT
GCTGCTCTGC TGTTAGTCCT TCTGCTGGTC TGGTTAAGTC GCCGTTGGTG GCTGGCCCGG
CAACGGGACA CTGCGGAGGC ACGGCGCGAT CGCTAA
 
Protein sequence
MDRWIDMTMD RLGYWGIGLL MFLENLFPPI PSELIMPLAG YSAAQGQLAL FPAIVAGVVG 
TMVGALPWYY LGRWLGEDRI LLWLERHGRW LGIRPHELQR SRRWFNRHGR KVVFWGRLIP
GIRTLISLPA GFERMRLREF LIYSTLGTTI WVLLLTLAGY KLRRNFALVE QWLAPVSKGV
AALLLVLLLV WLSRRWWLAR QRDTAEARRD R