| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0616 |
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| Symbol | hrcA |
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| ID | 3775598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 606238 |
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| End bp | 607299 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799027 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_399635 |
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| Protein GI | 81299427 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.868365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.54676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGTGT CTCGGCTTAC GGCCCGCCAA CAAACGATTC TCAGTGCCAC GGTGCGCCAC
TATGTGCGGA CGGCGGAGCC GGTCGGGTCT AAGGCATTAG CGGAACAGTA CGGTCTCAGC
GTCAGTGCGG CGACGATTCG TAATGCTATG GGGGTGTTGG AGCGCGCAGG CTTGCTCTAT
CAACCCCACA CCTCGGCGGG TCGGGTTCCC TCTGAGGGCG GCTATCGCCT CTACGTCGAT
CAGCTAATGG AGCCCGATCG CGCTCTGCAA CGTCAGACGG AGCAACAACT CAGTCAACAA
CTGCCCGATC GCCGTCAGAG CCTCGAAGCG CTGCTACGCG GGGCTGCCCA AATTCTGGCG
AGCCTCAGCG GCTATCTCAG CCTAATCACC TTTCCACTGG GCTTGGAATT CCAAGTGCGG
CATCTGCAAT TGGTGGCGAT CGCGCCGCAT CAGGTGTTGC TGATTGTTGT CAATGACAGC
TACGAAACCC AGTCGGCATT GCTGACCCTG CCAGAACTGG ATCGGGATCT GGAGGCCGAT
CAACTCGATC GCCAATTGCT ATTGCTCAGC AATTTTCTCA ATCAAGAACT GCAAGGGCGA
TCGCTGCAGG CTTTAGCGAA TCTGGATTGG CCTGTTTTGG GATCGGAGCT GCAAAGTCTG
GCGGGAATTC TGCAGCAGGG CTTGCAAGAT CTGGAAAAGC GCTGGCAACC AACCCCAGCG
ACCTCCCTGC TGGTCTGTGG CCTAGCGGAC TTGTTGCGCC AGCCAGAATT CAACGAGCTG
CAACAGGTAC AGGCGCTGTT GGAGTTGCTG GAAGGTGAAC AGACGCAGTT GCTGCCCTTG
ATGCTGGCGG ATCCTGCGGC TGATCAGGTG CGGGTGCGGA TTGGCTCCGA GCTGCCTCTA
GCACCGATTC GCAGCTGTAG CTTGGTGTCG GCCTTCTACT GTCGGGAGCA GCAGCCAGTC
GGCAGTGTCA GTTTGATCGG CCCGACCCGC ATGCTCTACG AAAATGCAGT AGCAGCGGTG
GAAGCCACCG CCAGCTACCT GAGTGAGGCG ATCGCCTCCT AG
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| Protein sequence | MLVSRLTARQ QTILSATVRH YVRTAEPVGS KALAEQYGLS VSAATIRNAM GVLERAGLLY
QPHTSAGRVP SEGGYRLYVD QLMEPDRALQ RQTEQQLSQQ LPDRRQSLEA LLRGAAQILA
SLSGYLSLIT FPLGLEFQVR HLQLVAIAPH QVLLIVVNDS YETQSALLTL PELDRDLEAD
QLDRQLLLLS NFLNQELQGR SLQALANLDW PVLGSELQSL AGILQQGLQD LEKRWQPTPA
TSLLVCGLAD LLRQPEFNEL QQVQALLELL EGEQTQLLPL MLADPAADQV RVRIGSELPL
APIRSCSLVS AFYCREQQPV GSVSLIGPTR MLYENAVAAV EATASYLSEA IAS
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