Gene Synpcc7942_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0613 
Symbol 
ID3775595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp603504 
End bp603992 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID637799024 
Productphosphohistidine phosphatase, SixA 
Protein accessionYP_399632 
Protein GI81299424 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID[TIGR00249] phosphohistidine phosphatase SixA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.639252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCT ATCTGATCCG CCATGGCATC GCCGCCGAAC GGGGCACCTA CGCGGATGAT 
GACCGGCGCC CCCTGACAGC CACGGGAGAA CGCCGCAGTC AACGAGTTGC CCAGCGACTG
CTGTCTCTCG GTCTGCATTT CGATGTTCTG CAAACCAGTC CCCTAGTCCG CGCCCACCAA
ACCGCCGTCA TCCTTCAACA AGAGGGGCTG GCTTCCCAAA TCGCGATCGC CCCAGAATTA
GCGCCCGAAG GCAGTCTGAC CGCTTGGCTC CGGCGCTTAC CGCCCGCCAT CTCGGCTGAT
CAGCGCTGGG CGATCGTGGG CCATGAACCC GATCTAGGGG TCTGGGCGGA ACAGCTGGTC
TGGGGATCTG CCCAGGACAA GCTCGTTCTC AAGAAAGCCG GTCTGATCGG TCTGCAATTC
CCAGGCGATC GCCCTGCGAT CGGAGCCGGA TCCCTCTTCT GGCTAACCCC CCCGCGCCTT
CTCCTTTAG
 
Protein sequence
MELYLIRHGI AAERGTYADD DRRPLTATGE RRSQRVAQRL LSLGLHFDVL QTSPLVRAHQ 
TAVILQQEGL ASQIAIAPEL APEGSLTAWL RRLPPAISAD QRWAIVGHEP DLGVWAEQLV
WGSAQDKLVL KKAGLIGLQF PGDRPAIGAG SLFWLTPPRL LL