Gene Synpcc7942_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0612 
Symbol 
ID3775594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp602209 
End bp603369 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content58% 
IMG OID637799023 
Productcitrate synthase 
Protein accessionYP_399631 
Protein GI81299423 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.148892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCG TCAGCGAGTT TCGGCCTGGC CTAGAAGGCG TGCCCGCCAC ACTCTCGAGC 
ATTAGCTTTG TCGATGGCCA GCGCGGCGTC CTAGAGTATC GCGGCATCAG CATCGAGCAA
CTGGCGCAAC AGAGCAGTTT TCTGGAAACC GCCTACCTGT TGATTTGGGG CCATCTACCA
ACTCAGCAGG AATTGACCGA GTTCGAGCAC GAAATTCGCT ACCACCGCCG CATCAAGTTC
CGCATCCGGG ACATGATGAA ATGCTTCCCC GATAGCGGCC ATCCTATGGA TGCCCTGCAG
GCGAGCGCCG CAGCCCTCGG GTTGTTCTAT TCGCGGCGCG CCTTGGATGA TCCCGAATAC
ATTCGGGCGG CCGTTGTGCG TTTGCTAGCC AAAATTCCGA CGATGGTGGC TGCCTTCCAG
CTGATCCGCA AGGGTAACGA CCCAATTCAG CCCCGCGATG AACTGGACTA CGCCGCCAAC
TTTCTCTACA TGCTGACGGA GCGCGAGCCC GATCCAGTCG CAGCTCGGAT TTTTGATATT
TGCCTCACCC TGCACGCCGA ACATACGATC AACGCCTCGA CCTTCTCGGC GATGGTCACA
GCTTCGACCC TGACCGATCC CTACGCTGTC GTTGCTTCTG CCGTTGGCAC CTTGGCTGGC
CCCCTCCATG GCGGCGCCAA TGAAGAAGTG CTGGACATGC TGGAGGCGAT CGGTTCCGTC
GAGAATGTTG AGCCCTACCT CGACCACTGC ATTGCCACCA AAACGCGCAT TATGGGCTTT
GGGCACCGTG TCTACAAAGT CAAGGATCCG CGGGCAGTCA TTCTGCAAAA TCTGGCCGAG
CAACTGTTCG ATATCTTCGG CCATGATCCC TACTACGAAA TCGCGGTCGC AGTCGAAAAG
GCAGCAGCCG AGCGACTCAG CCACAAGGGC ATTTACCCCA ACGTCGATTT CTACTCCGGC
TTGGTCTATC GCAAGCTCGG TATTCCTAGC GATCTATTCA CACCGGTGTT TGCGATCGCG
CGGGTTGCGG GCTGGCTCGC CCACTGGAAA GAGCAGCTGA ACGAAAATCG GATCTTCCGC
CCCACTCAGA TCTACACGGG CAGCCACAAC CTCGACTACA CCCCGATCGC CGATCGGGAT
TTGGCGATCG AATCTGATTG A
 
Protein sequence
MTAVSEFRPG LEGVPATLSS ISFVDGQRGV LEYRGISIEQ LAQQSSFLET AYLLIWGHLP 
TQQELTEFEH EIRYHRRIKF RIRDMMKCFP DSGHPMDALQ ASAAALGLFY SRRALDDPEY
IRAAVVRLLA KIPTMVAAFQ LIRKGNDPIQ PRDELDYAAN FLYMLTEREP DPVAARIFDI
CLTLHAEHTI NASTFSAMVT ASTLTDPYAV VASAVGTLAG PLHGGANEEV LDMLEAIGSV
ENVEPYLDHC IATKTRIMGF GHRVYKVKDP RAVILQNLAE QLFDIFGHDP YYEIAVAVEK
AAAERLSHKG IYPNVDFYSG LVYRKLGIPS DLFTPVFAIA RVAGWLAHWK EQLNENRIFR
PTQIYTGSHN LDYTPIADRD LAIESD