Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0612 |
Symbol | |
ID | 3775594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 602209 |
End bp | 603369 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799023 |
Product | citrate synthase |
Protein accession | YP_399631 |
Protein GI | 81299423 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.148892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCG TCAGCGAGTT TCGGCCTGGC CTAGAAGGCG TGCCCGCCAC ACTCTCGAGC ATTAGCTTTG TCGATGGCCA GCGCGGCGTC CTAGAGTATC GCGGCATCAG CATCGAGCAA CTGGCGCAAC AGAGCAGTTT TCTGGAAACC GCCTACCTGT TGATTTGGGG CCATCTACCA ACTCAGCAGG AATTGACCGA GTTCGAGCAC GAAATTCGCT ACCACCGCCG CATCAAGTTC CGCATCCGGG ACATGATGAA ATGCTTCCCC GATAGCGGCC ATCCTATGGA TGCCCTGCAG GCGAGCGCCG CAGCCCTCGG GTTGTTCTAT TCGCGGCGCG CCTTGGATGA TCCCGAATAC ATTCGGGCGG CCGTTGTGCG TTTGCTAGCC AAAATTCCGA CGATGGTGGC TGCCTTCCAG CTGATCCGCA AGGGTAACGA CCCAATTCAG CCCCGCGATG AACTGGACTA CGCCGCCAAC TTTCTCTACA TGCTGACGGA GCGCGAGCCC GATCCAGTCG CAGCTCGGAT TTTTGATATT TGCCTCACCC TGCACGCCGA ACATACGATC AACGCCTCGA CCTTCTCGGC GATGGTCACA GCTTCGACCC TGACCGATCC CTACGCTGTC GTTGCTTCTG CCGTTGGCAC CTTGGCTGGC CCCCTCCATG GCGGCGCCAA TGAAGAAGTG CTGGACATGC TGGAGGCGAT CGGTTCCGTC GAGAATGTTG AGCCCTACCT CGACCACTGC ATTGCCACCA AAACGCGCAT TATGGGCTTT GGGCACCGTG TCTACAAAGT CAAGGATCCG CGGGCAGTCA TTCTGCAAAA TCTGGCCGAG CAACTGTTCG ATATCTTCGG CCATGATCCC TACTACGAAA TCGCGGTCGC AGTCGAAAAG GCAGCAGCCG AGCGACTCAG CCACAAGGGC ATTTACCCCA ACGTCGATTT CTACTCCGGC TTGGTCTATC GCAAGCTCGG TATTCCTAGC GATCTATTCA CACCGGTGTT TGCGATCGCG CGGGTTGCGG GCTGGCTCGC CCACTGGAAA GAGCAGCTGA ACGAAAATCG GATCTTCCGC CCCACTCAGA TCTACACGGG CAGCCACAAC CTCGACTACA CCCCGATCGC CGATCGGGAT TTGGCGATCG AATCTGATTG A
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Protein sequence | MTAVSEFRPG LEGVPATLSS ISFVDGQRGV LEYRGISIEQ LAQQSSFLET AYLLIWGHLP TQQELTEFEH EIRYHRRIKF RIRDMMKCFP DSGHPMDALQ ASAAALGLFY SRRALDDPEY IRAAVVRLLA KIPTMVAAFQ LIRKGNDPIQ PRDELDYAAN FLYMLTEREP DPVAARIFDI CLTLHAEHTI NASTFSAMVT ASTLTDPYAV VASAVGTLAG PLHGGANEEV LDMLEAIGSV ENVEPYLDHC IATKTRIMGF GHRVYKVKDP RAVILQNLAE QLFDIFGHDP YYEIAVAVEK AAAERLSHKG IYPNVDFYSG LVYRKLGIPS DLFTPVFAIA RVAGWLAHWK EQLNENRIFR PTQIYTGSHN LDYTPIADRD LAIESD
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