| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0610 |
|---|
| Symbol | |
|---|
| ID | 3775592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 597977 |
|---|
| End bp | 599776 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637799021 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_399629 |
|---|
| Protein GI | 81299421 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTCTG TTTTGCGAGG GAGAACGGTG GGTTTGCAGG GCTATCCCCA TCGCGGGAGA
CGACGGATTC GCTGGGCAGG GCTGTGGGTG CTGGGTTTGT TGCTCGCGAT CGCTTGGCCA
TCGGCTGCTC AAGTGGCACC AGCTCTGCCA ACCCCAGCTA GCAATCCCCC AGCGCAAGTC
AAACGTTTTG GCAATGTCGA GGTTGCGCCT GTACGCCTGC CCCTCCTGCA GACGCCGCTT
CTAGAGGTGA CGGCTCCGAC GGTCTATGAT CGCAGCGATC CCGCTCAGCA GCAGGCCAGT
GTCGAGCAAC GCGCCACGCA GATCAGTGCG AACCTCCGGC GGGCGCTCGA TCGCTTTCAA
GAAGCCAAGA CGATTCAGGT TGTCGTCTCT CAGCTGAACG GTGAACCGAT TTTGCTGTTG
AGTGATGGGC GATCGCAACC GATTCGCTTG GTGACTGTTA CCAGTCTTGA TGCGGACTAC
AACGGTCTAA GTCAAGCCGA ACTGGCGGAG CAATGGCGAT CGCAAATTCA GGCGGAAATT
GAGCGATCGC GCCAGATCCT CTCGCCGCGC AACTGGCTGG CCACGTTAGG CGCTGTGGCT
CGCATCCTTT GTTTGGCTGC GATCGCTTCT CTCTTGTTTT GGTGGGTGCA ACGGGAACTC
AACTATCGAG CAGCGCAACT CGAAGCACAG CAACGGGTTC CCGCTGCTGT CCCAGAGCCA
TCCACGCAGG AGGCGGAAGC CGAACCCTTG GCCCTGCTCC AGCAGCGATC GCACCTGTTG
AATCGCCTCC GACCTGTCAG TGTGCTAGAC GCAAAACTGA GTTGGAATCG CTGGTTTCGC
TGGCTCTTGT TTTGGCTACT GATCGCGCTC TGGTATTGGG CCAGCTTTCA GATCATTACC
GTTACGCCGG TGCTCGACCA GTTTCGCGAC GAATGGCTGA ATGTCCCGAT TCGCTTGATT
GGCCTCTGGT TTGCCGGCGG TGTGGCCATT CGCATTGCCC ATTTACTGAT TGAGCGATCG
GCCAAAGCCT GGGAGCGCAG TGCTCTCTTA GCCGTAGAGG GCGATCGCCG CCGCAGTGAG
CTGCGAGTGA CCACGATCGT GCGGGCGTCC AAAGGCCTAG CGACTGCACT GGTAGCCTTT
GCTGTCCTGC TAGCGGTCCT CAATACTCTA GGCTTACCAG CCAGCTCGGT TCTGGCAGGA
AGCGCCATTT TGGGTTTGGC GATCTCCTTT GGCTCCCAGA GTTTGGTCAA GGATTTGGTC
AACGGCTGCC TGATTTTGGT GGAAGACCAA TTCGCAGTTG GCGATGTAAT TAATGTCAAC
GGTCAGGGGG GCCTCGTCGA AACCCTCAAC CTGCGAGTCA CCCAAATTCG TGATGCGGAA
GGTGGTTTGA TCACCATTCC CAACAGCACG ATTTCTCAAG TCCGCAACCT CTCGCGTACT
TGGTCGCGGG TCGATTTCAA CCTAGAAGTG GGTTGGGAGA ATGATGTCGA TCAGGTTTTG
GCCTGTCTAA CGCACGTGGT AGAGAACCTC TACGCGGATC CGGAATGGCA AGCCCTGATC
TGTGAACCGC CAGAGGTGTT GGGGGTCGAT GCGATCGCCC ACCAAGGTGT GCTGATCAAG
ATTTGGATCA AAACCCAGCC ATTGATGCAG TGGAAAGTCG GACGGGAATT GCGGCGGCGC
GTGCATCACG CCTTGCAAGC AGAAGGCATC AGTATTGGTC GCCCGCAACA GCTGGTCTAC
TGGCCGGAGT TAGAAGGGCA GCCCCAACCG GAAGGGGCGA TCGCCGCAGG CCGCCACTGA
|
|---|
| Protein sequence | MESVLRGRTV GLQGYPHRGR RRIRWAGLWV LGLLLAIAWP SAAQVAPALP TPASNPPAQV
KRFGNVEVAP VRLPLLQTPL LEVTAPTVYD RSDPAQQQAS VEQRATQISA NLRRALDRFQ
EAKTIQVVVS QLNGEPILLL SDGRSQPIRL VTVTSLDADY NGLSQAELAE QWRSQIQAEI
ERSRQILSPR NWLATLGAVA RILCLAAIAS LLFWWVQREL NYRAAQLEAQ QRVPAAVPEP
STQEAEAEPL ALLQQRSHLL NRLRPVSVLD AKLSWNRWFR WLLFWLLIAL WYWASFQIIT
VTPVLDQFRD EWLNVPIRLI GLWFAGGVAI RIAHLLIERS AKAWERSALL AVEGDRRRSE
LRVTTIVRAS KGLATALVAF AVLLAVLNTL GLPASSVLAG SAILGLAISF GSQSLVKDLV
NGCLILVEDQ FAVGDVINVN GQGGLVETLN LRVTQIRDAE GGLITIPNST ISQVRNLSRT
WSRVDFNLEV GWENDVDQVL ACLTHVVENL YADPEWQALI CEPPEVLGVD AIAHQGVLIK
IWIKTQPLMQ WKVGRELRRR VHHALQAEGI SIGRPQQLVY WPELEGQPQP EGAIAAGRH
|
|---|
| |