Gene Synpcc7942_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0605 
Symbol 
ID3775587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp593711 
End bp594694 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content55% 
IMG OID637799016 
Producthypothetical protein 
Protein accessionYP_399624 
Protein GI81299416 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0343991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.65798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC CCCCTCACAA CGAAACCTAC AGTTGGATTC GCAGCTCCCT ACGTTTGCGC 
GGCTCGGTAG TGCCGATTAT CCTGCCGCAG GTGATTTACA GCAGTCTGTT TGGGGTGGTT
GTGGCTTGGG TGCACTCCAA CATCCTCTCG TTGGATTTGC CTGCACTGAG TAGCCTCATT
CCCAATATTG TCCTAGGTTT GCTGCTGGTC TTTCGCACCA ACACTGCCTA CGAGCGTTTT
TGGGAAGGCC GACGCATTTG GGGCAACCAA ATTAATCAGA CCCGGAATTT AGCGCGGCTG
ATGTGGGTTG AAATTCCCCA CGGCGATCGC GATGCCGAAC AGCAACTTCG TCAGGCAACA
GGCTGGCTAG TAGCGCTCAG CATCGTCATG AAGCAGTGGT TACGGCGCCA GCCCCTTGAA
GCCGAGGAAC TGAATGATCT CGTCAGTCCC GCTGACTATC AAAAACTCCT GCGATCGCCC
CATCCCGTCT TAGAAGTCGC ATTATGGATC GACCGCTACC TACAACAGCA ACTTCAGCGC
GGTCTAGCGG TCTATCAGCT CAACGAACAA AAGCGACTGT TAAACGGCCT GATCGACTGT
CTTGGAGGCT GTGAACGCAT CCGCAACACT CCCATGCCTT TGGCTTACAG CGTTCACCTC
AAGCAACTGA TGCTGATCTA CTGCTTCACT ATGCCCCTGC AATTAGTGGG GAGTTTGGGC
TGGCGCATGC CCTTAGTCGT GGGAATTATC AGCTTTGCGC TGCTGGGGAT TGAGGCGATC
GGTCATGAAA TCGAAAATCC TTTTGGGATG GATGCCAATG ACCTGCGCCT CGAGCAGTTT
TGCAACACTC TGCGTAGTAA CCTCCAGCCT TTTTTGCCGG ACGGCGCCAT TGAGCGATCG
CAACCCGAGT CGCAGCCCGT CTCGACAACG GCTGAGCCTC TGCTACCAGC GATCCGTGTC
CCTACTCGCG ATCGCCCATC CTAA
 
Protein sequence
MAEPPHNETY SWIRSSLRLR GSVVPIILPQ VIYSSLFGVV VAWVHSNILS LDLPALSSLI 
PNIVLGLLLV FRTNTAYERF WEGRRIWGNQ INQTRNLARL MWVEIPHGDR DAEQQLRQAT
GWLVALSIVM KQWLRRQPLE AEELNDLVSP ADYQKLLRSP HPVLEVALWI DRYLQQQLQR
GLAVYQLNEQ KRLLNGLIDC LGGCERIRNT PMPLAYSVHL KQLMLIYCFT MPLQLVGSLG
WRMPLVVGII SFALLGIEAI GHEIENPFGM DANDLRLEQF CNTLRSNLQP FLPDGAIERS
QPESQPVSTT AEPLLPAIRV PTRDRPS