Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0604 |
Symbol | |
ID | 3775586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 592890 |
End bp | 593633 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799015 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_399623 |
Protein GI | 81299415 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000939667 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.65152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGGG CACCAGCTGT TGGTAAACTG AGGAGCGATC GCCGCTTCAG TCCAAAGGCT ATGACGCAAA AATCCGTTGT TATTGCTCCG TCCATTCTGT CAGCGGATTT CAGCCGCTTG GGCGACGATG TCCGCGCTGT TGACCAGGCT GGCGCTGACT GGATTCACGT CGATGTGATG GATGGTCGCT TCGTCCCTAA CATCACCATT GGACCGCTGA TCGTTGAAGC GCTGCGCCCG GTGACCCAAA AGCCGTTGGA CGTCCACTTG ATGATCGTCG AGCCGGAAAA ATATGTGCCG GATTTCGCGA AAGCAGGGGC TGACATCATC TCGGTCCAAG CAGAAGCTTG CCCCCACCTG CACCGCAACT TGGCTCAGAT CAAAGACCTC GGCAAGCAAG CAGGCGTCGT CCTCAACCCC TCTACCCCAG TCGAAACCCT GGAATACGTG CTGGAGTTGT GCGACCTGAT TTTGATCATG AGCGTCAACC CTGGCTTCGG TGGTCAGAGT TTCATCCCAG CTGTCCTGCC GAAAATCCGT AAGCTGCGCG CCATGTGCGA TGAGCGTGGC CTTGATCCTT GGATTGAAGT CGATGGCGGC TTGAAAGCCA ATAACACTTG GCAGGTGCTG GAAGCCGGTG CTAACGCAAT TGTGGCGGGC TCGGCAGTCT TCAACGCGCC GGACTATGCT GAAGCGATCG CGGCGATTCG CAACAGCAAG CGTCCTGAAC TTGTCACTGC TTAG
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Protein sequence | MARAPAVGKL RSDRRFSPKA MTQKSVVIAP SILSADFSRL GDDVRAVDQA GADWIHVDVM DGRFVPNITI GPLIVEALRP VTQKPLDVHL MIVEPEKYVP DFAKAGADII SVQAEACPHL HRNLAQIKDL GKQAGVVLNP STPVETLEYV LELCDLILIM SVNPGFGGQS FIPAVLPKIR KLRAMCDERG LDPWIEVDGG LKANNTWQVL EAGANAIVAG SAVFNAPDYA EAIAAIRNSK RPELVTA
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