Gene Synpcc7942_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0603 
SymbolglgC 
ID3775321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp591459 
End bp592751 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content56% 
IMG OID637799014 
Productglucose-1-phosphate adenylyltransferase 
Protein accessionYP_399622 
Protein GI81299414 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0448] ADP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR02091] glucose-1-phosphate adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00173495 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.408623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAACG TGCTGGCGAT CATTCTCGGT GGAGGCGCAG GCAGTCGTCT CTATCCACTA 
ACCAAACAGC GCGCCAAACC AGCGGTCCCC CTGGCGGGCA AATACCGCTT GATCGATATT
CCCGTCAGCA ATTGCATCAA CGCTGACATC AACAAAATCT ATGTGCTGAC GCAGTTTAAC
TCTGCCTCGC TCAACCGCCA CCTCAGTCAG ACCTACAACC TCTCCAGCGG CTTTGGCAAT
GGCTTTGTTG AGGTGCTAGC AGCTCAGATT ACGCCGGAGA ACCCCAACTG GTTCCAAGGC
ACCGCCGATG CGGTTCGCCA GTATCTCTGG CTAATCAAAG AGTGGGATGT GGATGAGTAC
CTGATCCTGT CGGGGGATCA TCTCTACCGC ATGGACTATA GCCAGTTCAT TCAGCGGCAC
CGAGACACCA ATGCCGACAT CACACTCTCG GTCTTGCCGA TCGATGAAAA GCGCGCCTCT
GATTTTGGCC TGATGAAGCT AGATGGCAGC GGCCGGGTGG TCGAGTTCAG CGAAAAGCCC
AAAGGGGATG AACTCAGGGC GATGCAAGTC GATACCACGA TCCTCGGGCT TGACCCTGTC
GCTGCTGCTG CCCAGCCCTT CATTGCCTCG ATGGGCATCT ACGTCTTCAA GCGGGATGTT
CTGATCGATT TGCTCAGCCA TCATCCCGAG CAAACCGACT TTGGCAAGGA AGTGATTCCC
GCTGCAGCCA CCCGCTACAA CACCCAAGCC TTTCTGTTCA ACGACTACTG GGAAGACATC
GGCACGATCG CCTCATTCTA CGAGGCCAAT CTGGCGCTGA CTCAGCAACC TAGCCCACCC
TTCAGCTTCT ACGACGAGCA GGCGCCGATT TACACCCGCG CTCGCTACCT GCCGCCAACC
AAGCTGCTCG ATTGCCAGGT GACCCAGTCG ATCATTGGCG AGGGCTGCAT TCTCAAGCAA
TGCACCGTTC AGAATTCCGT CTTAGGGATT CGCTCCCGCA TTGAGGCCGA CTGCGTGATC
CAGGACGCCT TGTTGATGGG CGCTGACTTC TACGAAACCT CGGAGCTACG GCACCAGAAT
CGGGCCAATG GCAAAGTGCC GATGGGAATC GGCAGTGGCA GCACCATCCG TCGCGCCATC
GTCGACAAAA ATGCCCACAT TGGCCAGAAC GTTCAGATCG TCAACAAAGA CCATGTGGAA
GAGGCCGATC GCGAAGATCT GGGCTTTATG ATCCGCAGCG GCATTGTCGT TGTGGTCAAA
GGGGCGGTTA TTCCCGACAA CACGGTGATC TAA
 
Protein sequence
MKNVLAIILG GGAGSRLYPL TKQRAKPAVP LAGKYRLIDI PVSNCINADI NKIYVLTQFN 
SASLNRHLSQ TYNLSSGFGN GFVEVLAAQI TPENPNWFQG TADAVRQYLW LIKEWDVDEY
LILSGDHLYR MDYSQFIQRH RDTNADITLS VLPIDEKRAS DFGLMKLDGS GRVVEFSEKP
KGDELRAMQV DTTILGLDPV AAAAQPFIAS MGIYVFKRDV LIDLLSHHPE QTDFGKEVIP
AAATRYNTQA FLFNDYWEDI GTIASFYEAN LALTQQPSPP FSFYDEQAPI YTRARYLPPT
KLLDCQVTQS IIGEGCILKQ CTVQNSVLGI RSRIEADCVI QDALLMGADF YETSELRHQN
RANGKVPMGI GSGSTIRRAI VDKNAHIGQN VQIVNKDHVE EADREDLGFM IRSGIVVVVK
GAVIPDNTVI