| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0598 |
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| Symbol | |
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| ID | 3775316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 585701 |
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| End bp | 587473 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799009 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_399617 |
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| Protein GI | 81299409 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000165223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAATG GGTACCCCCA TTCATCGACT GTCGCAGTTC TGCCAGTTTT TGACCTTCCA
GCCTTGTGGT TGGTGACCGG CAAACTGACC AAGTTCAGAT TAGGAGGTAG GTCCTTGAAA
AGAGGATTCC CACAAAAAGT TTCCGGCCTT CCCTACTACA CCCTAGATTC GATGCCAGAG
ATTGCGCATC AAGGGTGTGC GGTTTCAGAA CCGGAGACTG CTGAAGAGCC TCTTGCCACG
GCCACCAGCG GATCTTGGAG CGGCAGTGGG CGCAAAAGAA CACTTGCCAT GATGGGCTTA
GCCCTCACGG TCGCTGGCAC TGATTCCCTC TTGCTTCGTC AAGCGACGGC TGTAGCGGCG
ACCAACGGTG TGATGCCCCA GCTCTTCGAC AACGAAGCTG AAGCCCCCGC TCGCACTCTC
TCCTCTCAAG AAATTCACCG TGTTCAACCA GGTGAAACGC TTTGGTCAAT CGCGCGGGCC
CATGGTTTGA CGGTCGCTCA GTTACTGACC TACAACCAAC TAACCGAAGG CACTACCCTT
CGCGTCGATC AGGTCCTCAA TCTGCAGCCC AAGGCTGTTG AGCCTGCGCC GATCGCAACG
GCAGCCCCCT TGGTTCAAGA CCCAGTTCAG CAGCACCTCT TGGCTCTTGC GGGAGATAGC
CGCTTGCCAT CTCCGGCGGC TGAGCGATCG GTAGAGCCGA TTTCGAGCGT GCCGCCCCAG
GCGACTCCGA CTCTGCCTCG CCCTGTTACC GCAGAAGCAC CTGTCATTCA GCCCCGCTCC
CTAGCACCTG CTGCAGTCGC CATCCGTCCC CTCAGCCCAG CGACTGAGCT CTCCCCAGAG
CCCCAGGCTT ACACGGTGCA GCCTGGTGAC TCACTCAGTC GGATTGCGAC TCGGTTTGGC
TTGGACTTGC AGGATTTGCT TCAGGTCAAT CGCCTCAGCA ATCCCAACCT GATTTTTGTG
GGCCAGCGCT TAACCATCCC CCCAGCGGGT CAGGCTAGAT TGGCTCCCGT TGCTACCCTG
CCGCCGCTGC TGCGCCAACA GGTGACGGAA GATACGTCTA GCCGAATTGC CGCTAATCTT
GGCTCTGGGC TTAATGCCGA ATTGACCATC GAGAGTTTAT CTTCGCCGCC GCCCAGCAAC
CTGAAGAGCT TGGATATTAC GGCTCAGACC TCGTTCTCTG GCCCATCGCT TTCTTCATCG
CGATCGCTGA CGCCCGCCCT GCCTTCGGCA ACGCCGTTCA AGCCCCAACA GCCTGAGCCG
GATAAAGTCG CTGTCGCCCC CCTCGGTTCC GAAAACTACG AGCCGCTCCT TGCCTCGCTG
CTCAAAACAG CTGTCGCCCC CGAATTGCCT AGCCTCAACT CGGATGAGCT TTTGCCGGGA
GGCGGCGATC GCTTCGCGGG TTACATTTGG CCCGCACGGG GTATCCTTTC TTCGGGTTAT
GGCTGGCGCT GGGGCCGTAT GCACCGTGGC ATTGACATCG CTGGGCCGGT AGGAACGCCG
ATTCTGGCCG CAGCACCTGG GGTAGTGGTC ACGGCAGGTT GGAACTCCGG AGGCTACGGC
AACTTGGTTG AAATCCAACA CCCCAATGGC AGCCTGACGC TCTATGCTCA CAACAACCGT
ATCTTGGTGC GTCCAGGTGA GCGTGTCCAG CAGGGTCAAA TCGTCGCTGA AATGGGTAGT
ACTGGCCGCA GCACTGGCCC GCACCTGCAC TTCGAAGTGC ATCCGCGTGG GAATGGCGCA
GTCAACCCGA TCGCCTATCT CCCTTCTCGC TAG
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| Protein sequence | MANGYPHSST VAVLPVFDLP ALWLVTGKLT KFRLGGRSLK RGFPQKVSGL PYYTLDSMPE
IAHQGCAVSE PETAEEPLAT ATSGSWSGSG RKRTLAMMGL ALTVAGTDSL LLRQATAVAA
TNGVMPQLFD NEAEAPARTL SSQEIHRVQP GETLWSIARA HGLTVAQLLT YNQLTEGTTL
RVDQVLNLQP KAVEPAPIAT AAPLVQDPVQ QHLLALAGDS RLPSPAAERS VEPISSVPPQ
ATPTLPRPVT AEAPVIQPRS LAPAAVAIRP LSPATELSPE PQAYTVQPGD SLSRIATRFG
LDLQDLLQVN RLSNPNLIFV GQRLTIPPAG QARLAPVATL PPLLRQQVTE DTSSRIAANL
GSGLNAELTI ESLSSPPPSN LKSLDITAQT SFSGPSLSSS RSLTPALPSA TPFKPQQPEP
DKVAVAPLGS ENYEPLLASL LKTAVAPELP SLNSDELLPG GGDRFAGYIW PARGILSSGY
GWRWGRMHRG IDIAGPVGTP ILAAAPGVVV TAGWNSGGYG NLVEIQHPNG SLTLYAHNNR
ILVRPGERVQ QGQIVAEMGS TGRSTGPHLH FEVHPRGNGA VNPIAYLPSR
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