Gene Synpcc7942_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0594 
Symbol 
ID3775312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp581205 
End bp582881 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content60% 
IMG OID637799005 
Producthypothetical protein 
Protein accessionYP_399613 
Protein GI81299405 
COG category[R] General function prediction only 
COG ID[COG2936] Predicted acyl esterases 
TIGRFAM ID[TIGR00976] putative hydrolase, CocE/NonD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000382895 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.552928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCAG CACCTACCGA ACCAGTCGCT AGCCGCCATC ACCTGCCGGT TCAGCAAGAA 
GCACTCAGTC TCTGGACAAG CGACGGCATT CGCTTGGATG CCGACCTCTA TCGGCCGCAA
ACGGGGGAGC CCTTGCCCTT GCTACTGATG CGCCAGCCCT ACGGACGGGC GATCGCCTCC
ACGGTGGTCT ATGCCCATCC ACGCTGGTAT GCCGAGCAAG GCTATCTCGT GCTGGTGCAG
GATGTACGAG GCTGCGGCAG TTCGACCGGT GAGTTTCAGC TATTTGCTCA CGAAGCGGCA
GACGGTGCCG AGACGATCGC TTGGGCACAG CAACTGCCGG GATGCAATGG CCGGATTGGG
CTCTACGGTT TTTCCTACCA AGGCATGACC CAGCTCTACG CTGCCAGTCA GGCCAGTGGT
GCGGTGCGAG CGATCGCACC CGCCATGTTG GGGCCAGATC TCTACCGACA CTGGGCCACG
GAAGGTGGCG CTTTTCGCCT GCAGCTCAGT TTGGCTTGGG CACTACAACT AGCGGGACTC
CAAGCCCAGC GGCAACAAGA TCAGCAAGCT TGGCAACAGT TACGAGCGGC GGGTCAGCAA
CTGCAATCGG AAGCGGGAAT CCAAGCAGCA GAGACTCTGT TGCGCTCCAT CGATCCCCAC
TCATTTTACT TCGATTGGCA GCGATCGCCC GAGGATGCTT ACTGGACCGC GATCGCCCCC
AATCTGGCTC CAATTGATCT TCCTGCTCTG CACATTGGCG GCTGGTTTGA TCCCTACCTG
AATGGCACGA TCGCGACCTA TGAAATCCTG AAGCAGCAAA CCACGACTCC CCAATGGCTA
CGGATTGGGC CTTGGGCGCA TCTCCCTTGG GGTCGCAAGG CTGGAGCGAT CGATTTTGGC
CCTACCGCGA TCAGCCCAAT CGACGAGCTA CAGGTGCGTT GGTTCGATGC TTGGCTTAAG
GATCAGCCCG AGCGCCTCCA GGATGAGCCG GCGATCGCGG TCTTTGAAAT GGGTCGCAAC
CAGTGGCGAT CACTTGCCGA TTGGCCAACA GGAACATCAC AAGTTTGGTC GATCGCCAGT
GATGGGCTAG CAGCGATGCG CAGCGATCGC GGGCAGTTGC AACGGGCTGC CGCCGATCGC
GAGACTTTCG ACGTCGTCGT CCATGATCCT TGGCGGCCTG TACCGAACCT GGGCGGCCAT
AACGGCTTGG CAGCCGGGCC ACAGGAGCGC AGCGGGCTGG AGGAACGTAG CGATATTCTC
AAGTACCGCA GTCAACCTCT CTCGTCTGAC CTCTTGATCT GCGGACAACC GCGTCTCTAT
CTGATCTGTG AGAGCGATCG TCCCAGTTGG GATCTCTGCG TGGTGCTGTC GCGCCAAACC
GCTCGTGGTT TATGGGACTT CAGCCAAGGG TTTCGACGGA TTGCTCAAGC GGAAGCGGGT
GTAGGCTATT GGGTCGATCT GCAGCCCACC TGTCAGCGCC TTTTAGCGGG CGATCGCCTC
TGCCTGAGCA TTAGCCTTGC CGCCTATCCA GCCTTTGCCG TCAATCCTGG CCAGAGCGGA
CAACCAACGG CTACGGTGCC CGCTGAGGCA CGGATCATTA CCCTGCAAGT GCAGTCAGCA
GGAAGCTTTT TGGAGTTACC AACCGTTGCG ATCGCTGCCA GTTCCGAGTC AGCCTGA
 
Protein sequence
MIPAPTEPVA SRHHLPVQQE ALSLWTSDGI RLDADLYRPQ TGEPLPLLLM RQPYGRAIAS 
TVVYAHPRWY AEQGYLVLVQ DVRGCGSSTG EFQLFAHEAA DGAETIAWAQ QLPGCNGRIG
LYGFSYQGMT QLYAASQASG AVRAIAPAML GPDLYRHWAT EGGAFRLQLS LAWALQLAGL
QAQRQQDQQA WQQLRAAGQQ LQSEAGIQAA ETLLRSIDPH SFYFDWQRSP EDAYWTAIAP
NLAPIDLPAL HIGGWFDPYL NGTIATYEIL KQQTTTPQWL RIGPWAHLPW GRKAGAIDFG
PTAISPIDEL QVRWFDAWLK DQPERLQDEP AIAVFEMGRN QWRSLADWPT GTSQVWSIAS
DGLAAMRSDR GQLQRAAADR ETFDVVVHDP WRPVPNLGGH NGLAAGPQER SGLEERSDIL
KYRSQPLSSD LLICGQPRLY LICESDRPSW DLCVVLSRQT ARGLWDFSQG FRRIAQAEAG
VGYWVDLQPT CQRLLAGDRL CLSISLAAYP AFAVNPGQSG QPTATVPAEA RIITLQVQSA
GSFLELPTVA IAASSESA