Gene Synpcc7942_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0583 
Symbol 
ID3774821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp564123 
End bp565217 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content58% 
IMG OID637798991 
Productprotoporphyrin IX magnesium-chelatase 
Protein accessionYP_399602 
Protein GI81299394 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID[TIGR02030] magnesium chelatase ATPase subunit I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00224642 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0296662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCGA CTCTTCCGAC TGCGCCACGC CGCACTGTTT TCCCCTTCAC GGCGATCGTC 
GGCCAGGAGG AGATGAAGCT TGCCCTGCTG CTGAATGTGA TCGACCCCAA ATTGGGCGGG
GTGATGATCA TGGGCGATCG CGGTACTGGG AAATCAACCA CAATTCGTGC CTTGGCTGAC
CTACTGCCCG AAATTGAGGT GGTGGCAGAG GATCCCTACA ACAGCCATCC CAGCGATCCA
GAGCTGATGA GTAATGAGGT TCGCGATCGC ATTGCCCGTG GCGAAACCCC GACGATTGGT
CGCGCCAAAG TACAAATGGT CGACCTGCCT TTGGGTGCGA CGGAAGATCG CGTCTGCGGC
ACGATTGACA TCGAAAAAGC GCTGTCGGAA GGCGTCAAAG CCTTTGAACC GGGTCTACTC
GCAAAAGCCA ATCGTGGCAT TCTCTACGTC GACGAAGTCA ACCTGCTCGA CGATCATTTG
GTAGATGTGC TGCTGGACTC GGCGGCTTCT GGTTGGAATA CGGTGGAACG GGAAGGCGTA
TCGATTCGCC ACCCTGCTCG CTTCGTCTTG GTTGGTTCCG GTAACCCCGA GGAAGGTGAA
CTGCGGCCTC AGTTGCTTGA TCGCTTCGGT ATGAGTGTCG AAGTGCGCAC TGTCAAAGAT
CCGGAACTGC GGGTTCAGGT CGTAGAACAG CGATCGACCT TCGATCAAAA TCCTCAGACT
TTCCTCGATC GCTATGCCAG CGAGCAAGAT AGCCTGCAAG CACGGATTGT TGCAGCGCAA
ACGCTGCTGC CATCCGTTGA GCTGGACTAT GACCTGCGGG TGAAAATCTC GGAGGTCTGC
TCGGAGCTGG ATATTGACGG CCTGCGGGGT GACATCGTCA CCAACCGCGC TGCCAAAGCG
CTGACGGCCT TTGAAGGGCG GTCGGAAGTC ACCCTCGAAG ATATTCAGCG GATCGTTGCC
CCCTGTCTGC GGCACCGCCT CCGCAAGGAT CCGCTAGAGT CTGTGGACTC GGGGGGCAAA
GTGGCGAAAG TCTTCTGCCG TGTCTTTGGC CTGCCGGAGC CGACCGACAC CAGTGCCTTC
TCTCTGGTCA GCTAA
 
Protein sequence
MTATLPTAPR RTVFPFTAIV GQEEMKLALL LNVIDPKLGG VMIMGDRGTG KSTTIRALAD 
LLPEIEVVAE DPYNSHPSDP ELMSNEVRDR IARGETPTIG RAKVQMVDLP LGATEDRVCG
TIDIEKALSE GVKAFEPGLL AKANRGILYV DEVNLLDDHL VDVLLDSAAS GWNTVEREGV
SIRHPARFVL VGSGNPEEGE LRPQLLDRFG MSVEVRTVKD PELRVQVVEQ RSTFDQNPQT
FLDRYASEQD SLQARIVAAQ TLLPSVELDY DLRVKISEVC SELDIDGLRG DIVTNRAAKA
LTAFEGRSEV TLEDIQRIVA PCLRHRLRKD PLESVDSGGK VAKVFCRVFG LPEPTDTSAF
SLVS