| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0568 |
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| Symbol | |
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| ID | 3774806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 549371 |
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| End bp | 550687 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637798976 |
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| Product | cytosine deaminase-like protein |
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| Protein accession | YP_399587 |
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| Protein GI | 81299379 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.322505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00702757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGATCCTGT CTCTTGTCTT GCCTGAGAGC GATCGCTACT GTCTGCAGCA AGCGCGGGTT
CCACAAGCAG TCCTCACTGA CTGGAGCAGC CTCGGTCAAC CCGATTGGGA AGGTAACTTT
CTGATCGATC TTGAGATCGA CAGGGGCAAG ATTTGTGCGA TCGCCCCCAC CCAGTCCAGC
GCTGGCAACG TCGCCAGTCT GGATTTACAG GGTCGGCAAC TCTGGCCCGG ATTTGTCGAT
ATCCACACCC ACATCGATAA AGGACATATC TGGCCGCGCA GTCCCAATCC TGACGGCAGT
TTTGATGGCG CTTTGACGAC GGCGATCGCG GATTCTCAAA CCCACTGGAA TTCCGATGAG
TTGCTGGTGC GGATGGAATT TAGCCTGCGC TGTGCCTACG CCCACGGCAC GGTCGCGCTA
CGCACCCATC TCGATTCTGC AGGTGATTTG GCAGCCCAGG GCTTCACTGT TTTTCAGGAA
TTACGGGAAC GCTGGCGCGA TCGCCTGACG CTCCAAGCCG CTTCGCTAGT CTCCCTCGAT
CACTATCAGG GGGTAGCAGG AGAGCGGCTC GCCGATTTGG TAGCGGCAGC AGGCGGTCTA
CTCGGTGGAG TAACTTTTCC GTCGCCAGCC TTGGATGAGC AACTCGATCG CCTGCTGGAT
CTTGCCCGCG ATCGCCAGCT CGATCTGGAT TTGCATGTGG ATGAAAGCCT CAATCCAAGC
GATCGCACTC TGCTGCAGGT AGCTGCTGCC GTCCAACGCA ACGGCTTCAC CGGTAAAGTG
CTCTGCGGCC ACTGTTGTAG CTTGTCCGTA CAACCCGAGG CAGACTTACC GATTCAGTTA
CAGGCAGTGC AAGCGGCGGG ACTGGGGATT GTCTCACTAC CGCTCTGCAA TTCCTACCTA
CAGGATCGGC AGGCCGGTCG GACGCCACGA TTGCGCGGTA TTGCCCCAGT TCAAGAAATC
CAAGCGGCAG GGATTCCCAC CTTCCTCTCC AGCGACAACA GCCGCGATCC CTTCTATGCT
TACGGCGATT TGGACATGGT CGAAGTCTTT CGAGAGTCGG TGCGAATTGG GCAGCTCGAT
CATCCTTGGT CACCTTGGCC TGCTGCCGTC ACCCGTACGC CGGCGGATTG GATAGGACTG
CCAGATCAAG GCCGGATTGC GATCGGGGCG CGGGCTGATT TCGTGATTTT TAACGCCCGT
TCTTTCACAG AACTGCTGGC TCGCCCCCAA AGCGATCGCC TGATTGTGCG CAATGGCCGC
GCGATCGCGC CGGAACTGCC TGACTATGCT GAATTAGATG CAATCTTGGC GCAGTAG
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| Protein sequence | MILSLVLPES DRYCLQQARV PQAVLTDWSS LGQPDWEGNF LIDLEIDRGK ICAIAPTQSS
AGNVASLDLQ GRQLWPGFVD IHTHIDKGHI WPRSPNPDGS FDGALTTAIA DSQTHWNSDE
LLVRMEFSLR CAYAHGTVAL RTHLDSAGDL AAQGFTVFQE LRERWRDRLT LQAASLVSLD
HYQGVAGERL ADLVAAAGGL LGGVTFPSPA LDEQLDRLLD LARDRQLDLD LHVDESLNPS
DRTLLQVAAA VQRNGFTGKV LCGHCCSLSV QPEADLPIQL QAVQAAGLGI VSLPLCNSYL
QDRQAGRTPR LRGIAPVQEI QAAGIPTFLS SDNSRDPFYA YGDLDMVEVF RESVRIGQLD
HPWSPWPAAV TRTPADWIGL PDQGRIAIGA RADFVIFNAR SFTELLARPQ SDRLIVRNGR
AIAPELPDYA ELDAILAQ
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