| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0563 |
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| Symbol | |
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| ID | 3774801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 543654 |
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| End bp | 545654 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637798971 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_399582 |
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| Protein GI | 81299374 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.733421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.043063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCT TTCAACTGCA AGCCCGCTAT CAACCGATGG GAGACCAACC GACTGCGATC
GCGCAGTTGG TCGAACAAGT TCAGGCCGGT GCTCCCTATC AAACCTTGCT GGGCGCGACT
GGAACGGGCA AGACTTTTAC GATCGCCAAC GTGATTGCGC AGGTGGGGCG CCCAGCCTTA
GTACTGGCCC ACAACAAGAC CTTAGCGGCT CAGCTGTGCA ATGAGCTGCG TGAGTTTTTC
CCGAATAACG CCGTCGAGTA TTTCATCAGC TATTACGACT ACTATCAACC GGAAGCTTAC
ATTCCGGTGA CCGACACTTA TATCGCCAAA ACAGCTTCGA TCAATGAAGA GATCGATATG
CTTCGGCACT CCGCCACGCG AAACTTATTT GAGCGACGTG ATGTAATTGT CGTTGCTTCA
ATTAGCTGCA TCTATGGCTT GGGTATTCCT AGCGAGTATT TAAAAGCAGC AATCCCGCTA
GAAGTCGGGG CTGAAATCAA TATGCGCGAG GTTTTGCGAC AACTCGTTGA TGTTCAATAC
AGTCGCAATG ATCTGGAGTC AGGTCGCGGT CGATTCCGGG TGAAAGGCGA TGTCCTCGAA
ATCGGCCCAG CCTATGAGGA TCGGATTATT CGGGTCGAAT TTTTTGGTGA TGAAATTGAT
GCGATTCGCT ATATCGATCC AGTCACCGGC GAAATCCTCC AAAGCCTCGA TCGCCTCAAT
ATCTATCCTG CCCGTCACTT TGTGACGCCA GAAGAACGGC TGGAAATTGC GATCGCAGAA
ATCAAAGAAG AACTCAATCA GCAGCTCCTG ACTTTACAAG CAGAAGGCAA ACTGGTGGAG
GCTCAGCGGC TCGAGCAACG CACCCGCTAT GACCTCGAAA TGCTGCAGGA AGTGGGCTAC
TGCAACGGCG TTGAAAACTA TGCCCGCCAT CTCGCTGGCC GCGAGCCCGG ATCGCCCCCA
GAATGTCTGA TCGACTACTT CCCAAAAGAT TGGCTCCTCG TTGTTGATGA ATCCCACGTC
ACCGTTCCGC AGTTGCGGGG CATGTATAAC GGTGATCAGT CTCGCAAAAA GGTTTTGGTG
GATCACGGCT TCCGCTTGCC AAGCGCTGCA GATAACCGTC CACTAAAGTC GGAGGAATTT
TGGGAGAAAG TGCGTCAGTG CATTTTTGTC TCAGCAACGC CTGGTGATTG GGAAATAGAG
CGATCGGAAG AGCAGATTGT TGAGCAAGTG ATTCGCCCGA CAGGCGTGGT TGATCCCGAG
GTTTTCGTTC GCCCCACGGA AGGACAAGTT GATGATCTCC TCGCTGAAAT TCAGCAGCGG
GTCCGTCGCC AAGAGCGAGC ATTGATTACG ACGCTGACCA AGCGAATGGC TGAGGATTTA
ACGGATTATT TGAGCGATCG CGGCGTTAAA GTTCGCTATC TCCACTCAGA GATCAACTCG
ATCGAACGAA TTGAAATCCT GCAGGATTTG CGCAATGGCG ATTTTGATGT CTTGATTGGG
GTTAACTTGC TACGGGAAGG CTTAGACCTG CCAGAGGTAT CCCTAGTCGC TATTTTGGAT
GCCGACAAGG AAGGCTTTTT GCGGACGGAA CGCAGCCTCA TTCAAACGAT TGGGCGAGCA
GCTCGCCACA TCAATGGCCA AGCGATTCTG TATGCCGATC GCATGACCGA AAGTATGGAG
AAGGCGATCA GTGAAACGGA ACGACGGCGA CGTATTCAAT TGGATTACAA CCAACGTCAC
AACATTACCC CTCAACCGAT TATCAAGCGA TCGAGCAACG CCATTCTCTC GTTCCTTGAA
GTCTCGCGGC GGCTGAATAA GCAAGAGTTA GAAGTAGCAG TCAGTCAAGC CGATGATCTC
TCCCTCGAAG AGATTCCCAA CTTGATTACG CAACTAGAAG CCCAGATGAA AGAGGCCGCT
AAAAATCTGG AATTTGAGGA GGCTGCTCAA TACCGCGATC GCATTAAGAA ATTACGTGAA
CGACTGGTGG GTCGCCACTA A
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| Protein sequence | MTPFQLQARY QPMGDQPTAI AQLVEQVQAG APYQTLLGAT GTGKTFTIAN VIAQVGRPAL
VLAHNKTLAA QLCNELREFF PNNAVEYFIS YYDYYQPEAY IPVTDTYIAK TASINEEIDM
LRHSATRNLF ERRDVIVVAS ISCIYGLGIP SEYLKAAIPL EVGAEINMRE VLRQLVDVQY
SRNDLESGRG RFRVKGDVLE IGPAYEDRII RVEFFGDEID AIRYIDPVTG EILQSLDRLN
IYPARHFVTP EERLEIAIAE IKEELNQQLL TLQAEGKLVE AQRLEQRTRY DLEMLQEVGY
CNGVENYARH LAGREPGSPP ECLIDYFPKD WLLVVDESHV TVPQLRGMYN GDQSRKKVLV
DHGFRLPSAA DNRPLKSEEF WEKVRQCIFV SATPGDWEIE RSEEQIVEQV IRPTGVVDPE
VFVRPTEGQV DDLLAEIQQR VRRQERALIT TLTKRMAEDL TDYLSDRGVK VRYLHSEINS
IERIEILQDL RNGDFDVLIG VNLLREGLDL PEVSLVAILD ADKEGFLRTE RSLIQTIGRA
ARHINGQAIL YADRMTESME KAISETERRR RIQLDYNQRH NITPQPIIKR SSNAILSFLE
VSRRLNKQEL EVAVSQADDL SLEEIPNLIT QLEAQMKEAA KNLEFEEAAQ YRDRIKKLRE
RLVGRH
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