Gene Synpcc7942_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0562 
Symbol 
ID3774800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp543141 
End bp543596 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content50% 
IMG OID637798970 
Producthypothetical protein 
Protein accessionYP_399581 
Protein GI81299373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.90761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0249242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTG AATTTCGTGA ATTTAACCCC TTTGACTGCT GGATTTGGGT GGAATTTAGT 
ACTGTCCCTG CGCCCTTAGA GCAGCAATAT CTAGAGGAAT TGTTTGACTC CTGGTTTTTC
CTAGGCAAGC TAGGTGGCTT CAATGCTGAA AACCTGCAAG CTCAAGAAGA GGGCTTAGAA
CTGAGTTATA TGAGCTATCA GTCAGCTCAA GAGCGTTCTA GCCTGGCCGC CCTGATGCAC
AACATGGGAG AAGTCGAGTA TCAAGGGCGT TGGGCTCGCT GCTGGTTTGA TCTGGGTACC
AGTGACGCGA TCGCTTTAGA CGTATTGCTG AATGCCCTTC AGCGTCTGAG CGAAGAAATG
GTTGGGCTAG AGCAAGTCTT TGTCGGTGGT GAAAATGCCG ACTGGCCCTC ACCCGGACGC
CGTAGCTTGG ACTTTGCCGC AGACGACTGG AATTAG
 
Protein sequence
MQIEFREFNP FDCWIWVEFS TVPAPLEQQY LEELFDSWFF LGKLGGFNAE NLQAQEEGLE 
LSYMSYQSAQ ERSSLAALMH NMGEVEYQGR WARCWFDLGT SDAIALDVLL NALQRLSEEM
VGLEQVFVGG ENADWPSPGR RSLDFAADDW N