Gene Synpcc7942_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0552 
Symbol 
ID3774790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp534067 
End bp535185 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content59% 
IMG OID637798960 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_399571 
Protein GI81299363 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGG CTCCGATTCG CGTCTGCATC ACCTTGGGAA CTCGCCCCGA AGCGATTAAG 
TTGGCGCCGG TGATTCGAGC CTTTCAGCAG GACCCTACTT TTCAAACCCA AGTGGTCCTG
ACTGGCCAGC ACCGCGAGAT GGTTGAACAG GTGATGCAGC TGTTTGGCCT GCAACCCGAT
CGCGATTTGG CGATCATGCA GCCCCGCCAA ACCCTGACTA GTATTACCAG TCGCAGTCTC
GAAGGACTGG AAACTCTATT CCAAGAGTTA GAGCCACAAC TGGTTCTCGT CCAGGGCGAC
ACCACCACTG CCTTTGCGGC AGCCCTAGCG GCCTTTTATC AGAAAATTCC TGTCGGGCAC
GTTGAAGCGG GCCTGCGTAC CGATAATCTC TTCAATCCCT ATCCCGAGGA GGCCAATCGG
CGGCTGATTT CGCAAATTGC CCAGCTTCAC TTTGCACCGA CGCCGTTGGC GGTTGAGAAC
TTGCGAGCTT CTGGGGTGGT TGGCGAAGTG CATCTGACGG GCAACACGGT GATTGATGCC
CTGTTGACCG TGGCCGATCG CCAGCCTGAC TGCCCGATCG CGGGTTTAGA TTGGTCGCGC
TATCGGGTGC TGCTCGCAAC GGTGCACCGC CGTGAAAACT GGGGCGAACC GCTGCAGGAC
ATTGCTCAAG GCTTCCTAGC GATCCTCGAA GCGGTGCCGG ATGCTGCCCT CCTACTGCCC
CTGCACCGCA ACCCGACGGT GCGGGAGCCG CTGCAAGCCT TACTGGGCCA ACATCCTCGC
GTCTTTTTGA CTGAGCCGTT GGATTACAGC GAACTGGTCG GTGCGATTCA ACGATCGACC
CTGCTGCTAA CGGATTCGGG CGGTTTACAA GAAGAAGCTC CCAGCTTGGG TAAACCGGTG
TTGGTGCTAC GGGAAACAAC AGAGCGGCCG GAGGCAGTGA CAGCCGGCAC AGCCAAATTG
ATTGGTACCC AAGCCGATCG CATTGCCCAA GAAGCCCTGA CCTTGCTCCA AGATCCGGCC
GCCTATGCAG CGATGGCCAA TGCGGCAAAT CCCTTTGGCG ATGGTCAGGC TTCTGGCCGG
ATTGTCCAGC TCAGTCGCCA GTTCCTCGGC AGCGCCTAG
 
Protein sequence
MTQAPIRVCI TLGTRPEAIK LAPVIRAFQQ DPTFQTQVVL TGQHREMVEQ VMQLFGLQPD 
RDLAIMQPRQ TLTSITSRSL EGLETLFQEL EPQLVLVQGD TTTAFAAALA AFYQKIPVGH
VEAGLRTDNL FNPYPEEANR RLISQIAQLH FAPTPLAVEN LRASGVVGEV HLTGNTVIDA
LLTVADRQPD CPIAGLDWSR YRVLLATVHR RENWGEPLQD IAQGFLAILE AVPDAALLLP
LHRNPTVREP LQALLGQHPR VFLTEPLDYS ELVGAIQRST LLLTDSGGLQ EEAPSLGKPV
LVLRETTERP EAVTAGTAKL IGTQADRIAQ EALTLLQDPA AYAAMANAAN PFGDGQASGR
IVQLSRQFLG SA