Gene Synpcc7942_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0527 
Symbol 
ID3774765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp511398 
End bp512234 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content51% 
IMG OID637798935 
Producthypothetical protein 
Protein accessionYP_399546 
Protein GI81299338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGCC ATCCTGAAGG GGGATCTGTG AACAGGGCCT ACGCTTACCT CGGTCTGCTC 
CTACTCGTGA GCTCTTACTT CACTGCTCCA GCGATCGCTC GGCCAGTGCG TGGGGGTGGC
AGTCGCCCCA GCATCAGTAG ACCTGTAACC CGACCTGCTC CCAGTCGGCC AAATGTGAGC
CGACCCGTTA CGACACCTAA TCGTCCCAAT ATCACTCGAC CGATTAATAC GCCAAACCGA
CCCGTTAATG TTCCTAGTCG GCCTATCACC ACTCCTAACC GACCTATCAA CAACCCCAAT
CGGCCCATCA ACACGCCAAA TCGACCGATT ATCAATCAGC CGATCAATAA TCGACCAATC
ATTAATCGCC CAATTGGTTC TGGCAATACG ATCATCAACA ACCGCCCAAT CAATATCAAC
AACATCAATA CTCGTCCCAA TTGGGTCAAT CGGAATTGGG CAGCCTCTAG GCCTTGGGGA
GGTTATGGTT GGTATGGTAG CTGGGCTAAT CCACCTTGGG GGTGGTGGAC CGCCAATACT
GCTATCTGGG GAATTACATC TCTTGCCAGC GCTGCCATCA TCAGTAGCTC GATTGATAAT
GCTGTCAGCA CAAACGTTGT CTATATTCCA GTTCCTAACA GTTCCTATGA GCTTTACTAT
GGAACCATTG CGCCGACTAG TAGTAGTGTG ACAACCTTTG CCTTTGGCTA TGAAGGTCAA
ACCTATCAAG CAGTAGCAGA TTGTCAGCAA GGGCTACTGA ATGGTCAGCC TCCCACGACT
GCTGCAGAAG CTGAACTTTT GAATGCTGCT TGTCAGGTTG CTTTTGCCAG CTTCTAG
 
Protein sequence
MLSHPEGGSV NRAYAYLGLL LLVSSYFTAP AIARPVRGGG SRPSISRPVT RPAPSRPNVS 
RPVTTPNRPN ITRPINTPNR PVNVPSRPIT TPNRPINNPN RPINTPNRPI INQPINNRPI
INRPIGSGNT IINNRPININ NINTRPNWVN RNWAASRPWG GYGWYGSWAN PPWGWWTANT
AIWGITSLAS AAIISSSIDN AVSTNVVYIP VPNSSYELYY GTIAPTSSSV TTFAFGYEGQ
TYQAVADCQQ GLLNGQPPTT AAEAELLNAA CQVAFASF