Gene Synpcc7942_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0515 
Symbol 
ID3774752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp500143 
End bp500565 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content59% 
IMG OID637798922 
Producthypothetical protein 
Protein accessionYP_399534 
Protein GI81299326 
COG category[S] Function unknown 
COG ID[COG1547] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.905473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGCAC TGCTCACCGA TCCCCGCTAT CAAGCGGGTA TTGCCCTCTT TAACCAGCGG 
CAGTTCTACG CTTGCCACGA TGTCTTCGAA GCGTTGTGGC ACGAGGCGAT CGAGCCCGAT
CGCACTTTTT TGCAAGGCGT TTTGCAGATT GCAGTCGGGC TGCATCATCT CTCCAATAGC
AACCGACGCG GTGCCACGAT TCTGCTAGGG GAAGGCTGCG CCCGCCTGCA GGATTACCAA
CCCGACTATG CAACGGTGGA TGTCAGCCAC TTGCTCGCCC AGAGTCGACA GGTATTGCAA
GCCCTCCAGG GTTTACCCAG CGAGGATTGC GGTGAGGCGA TCGCGATCGG TTTGGGGCTG
CGTGCTGGGA CAGCTCCTAG CCTGCCCTGC CCTCAACTCT GTCTTCAAAC GAGCGGGGTA
TGA
 
Protein sequence
MSALLTDPRY QAGIALFNQR QFYACHDVFE ALWHEAIEPD RTFLQGVLQI AVGLHHLSNS 
NRRGATILLG EGCARLQDYQ PDYATVDVSH LLAQSRQVLQ ALQGLPSEDC GEAIAIGLGL
RAGTAPSLPC PQLCLQTSGV