Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0513 |
Symbol | |
ID | 3774750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 498901 |
End bp | 499653 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637798920 |
Product | ATPase |
Protein accession | YP_399532 |
Protein GI | 81299324 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.911954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGAGTA CCGCTGCGAT CGCTGTGAAG ATTCGCCTAG AAAATGTTCG GAAGTCCTAC GGCAAGCGCC TGATTGTTAA TCGCGTCAGC TTGTCCGTAG CCCAAGGCGA GGTTGTCGGG CTGCTCGGCC CCAATGGCGC GGGTAAAACC ACGACGTTTT ATATGACCAC TGGCCTTGAA CGGCCGGATG AAGGTCATGT CTGGCTGGAT GAAACGGAAC TCACCCGCCT GCCCATGACC CAGCGGGCCC GCCTTGGCAT TGGCTATCTC GCCCAAGAGG CCAGTATCTT CCGGCATCTG ACGGTGGTGG AGAACTTACT GCTAGTGCTG CAGCAAACTG GTATTCGGGG ACGAGAACAG CGCCAGCGAG TTGAGGAACT GCTCAGCGAG TTTCGGCTTG AAAAAGTGGC TCACACCCAA GGTATTCGCG TCTCTGGGGG TGAACGTCGC CGCACCGAGA TTGCCCGCGC CCTGGCTGTC GGCAGTCAGG GGCCAAAATT TTTGCTGCTG GATGAGCCCT TTGCCGGTAT TGACCCGATT GCTGTGGCCG AAGTGCAGGA GATCATCGCC CGACTCCGAG CCCAACAGAT GGGCATTTTG ATCACCGATC ACAACGTGCG GGAAACCCTG AAGATCACCG ATCGCGCCTA CATTCTGCGG GACGGAGAAA TCTTGGCAGC CGGCTCCGCC GAAGAGTTAG CGTCCAATCC TCTCGTCCGC CAATACTATT TGGGTGAAGA CTTCGTTTTC TGA
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Protein sequence | MPSTAAIAVK IRLENVRKSY GKRLIVNRVS LSVAQGEVVG LLGPNGAGKT TTFYMTTGLE RPDEGHVWLD ETELTRLPMT QRARLGIGYL AQEASIFRHL TVVENLLLVL QQTGIRGREQ RQRVEELLSE FRLEKVAHTQ GIRVSGGERR RTEIARALAV GSQGPKFLLL DEPFAGIDPI AVAEVQEIIA RLRAQQMGIL ITDHNVRETL KITDRAYILR DGEILAAGSA EELASNPLVR QYYLGEDFVF
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