Gene Synpcc7942_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0513 
Symbol 
ID3774750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp498901 
End bp499653 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content57% 
IMG OID637798920 
ProductATPase 
Protein accessionYP_399532 
Protein GI81299324 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.911954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGAGTA CCGCTGCGAT CGCTGTGAAG ATTCGCCTAG AAAATGTTCG GAAGTCCTAC 
GGCAAGCGCC TGATTGTTAA TCGCGTCAGC TTGTCCGTAG CCCAAGGCGA GGTTGTCGGG
CTGCTCGGCC CCAATGGCGC GGGTAAAACC ACGACGTTTT ATATGACCAC TGGCCTTGAA
CGGCCGGATG AAGGTCATGT CTGGCTGGAT GAAACGGAAC TCACCCGCCT GCCCATGACC
CAGCGGGCCC GCCTTGGCAT TGGCTATCTC GCCCAAGAGG CCAGTATCTT CCGGCATCTG
ACGGTGGTGG AGAACTTACT GCTAGTGCTG CAGCAAACTG GTATTCGGGG ACGAGAACAG
CGCCAGCGAG TTGAGGAACT GCTCAGCGAG TTTCGGCTTG AAAAAGTGGC TCACACCCAA
GGTATTCGCG TCTCTGGGGG TGAACGTCGC CGCACCGAGA TTGCCCGCGC CCTGGCTGTC
GGCAGTCAGG GGCCAAAATT TTTGCTGCTG GATGAGCCCT TTGCCGGTAT TGACCCGATT
GCTGTGGCCG AAGTGCAGGA GATCATCGCC CGACTCCGAG CCCAACAGAT GGGCATTTTG
ATCACCGATC ACAACGTGCG GGAAACCCTG AAGATCACCG ATCGCGCCTA CATTCTGCGG
GACGGAGAAA TCTTGGCAGC CGGCTCCGCC GAAGAGTTAG CGTCCAATCC TCTCGTCCGC
CAATACTATT TGGGTGAAGA CTTCGTTTTC TGA
 
Protein sequence
MPSTAAIAVK IRLENVRKSY GKRLIVNRVS LSVAQGEVVG LLGPNGAGKT TTFYMTTGLE 
RPDEGHVWLD ETELTRLPMT QRARLGIGYL AQEASIFRHL TVVENLLLVL QQTGIRGREQ
RQRVEELLSE FRLEKVAHTQ GIRVSGGERR RTEIARALAV GSQGPKFLLL DEPFAGIDPI
AVAEVQEIIA RLRAQQMGIL ITDHNVRETL KITDRAYILR DGEILAAGSA EELASNPLVR
QYYLGEDFVF