Gene Synpcc7942_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0504 
SymbolhemA 
ID3775209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp490382 
End bp491698 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content58% 
IMG OID637798911 
Productglutamyl-tRNA reductase 
Protein accessionYP_399523 
Protein GI81299315 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTCG CAGTTGTCGG CCTCAGCCAT CGGACAGCAC CGGTTGCCGT GCGCGAGAAG 
CTGAGCATCC CTGAACAGCA AGTTGAAGCC GCGATTCAGC AGCTGAAAAG CTACCCACAC
ATCGAAGAGG TGGCGATCCT CAGCACCTGC AACCGCCTCG AGATCTACTG TGTCACCCGT
GCTACTGAGC CCGGCGTGCG CGAAATCACC CAATTTTTGT CTGAGCACAG CCATCTGCCC
TTAGGGGAGT TGCGGCCTCA CCTGTTTGTC TTACTCCATC AAGACGCCGT CATGCACCTG
ATGCGGGTGG CGGCAGGCCT CGACAGTTTG GTGCTGGGCG AAGGCCAGAT TCTGTCCCAA
GTCAAAACCA TGTACAAGCT GGGGCAGCAG TACGAGGGCG TCGGTCGCAT CCTCAATCGT
CTGCTCAAAC AGGCCGTCAC CGCTGGCAAG CGTGTCCGCA CGGAAACCAG CATTGGCACC
GGCGCAGTCT CGATCAGTTC GGCAGCGGTG GAACTAGCGC AGCTCAAGGT CATTGCACGG
GACGATCGCA GCGACGGCAA CCTTGCGGGT CAGCGAGTGC TGATCCTGGG GGCAGGCAAG
ATGTCGCGTC TCCTCGTTCA ACACCTAATT GCAAAAGGGG CTGACACGAT TCAGATCCTC
AACCGCACCT TGGGTCGGGC GGAAGAACTA GCCAAACAAT ACGGCGGTGA TCTCCAGATT
CAGGTTGGTC TGCTCTCGGG CTTGATGAAT GCGATCGTGG AAGCAGACAT CGTCTTCACC
AGCACTTCAG CGACGGATCC CATCCTCGAT CGCGCCAAGC TGGAGATGGT GCTGGCCCCT
GAACAGCGGC TGATGCTGAT CGATATTGCC GTGCCGCGTA ACGTAGCTGC GGATGTGGTG
GAACTGACGA GCGTTGAGTC CTACAACGTT GATGACCTAC GCGAGGTCGT CGCCCAAAAC
CAAGAGAGCC GCCGCAAGCT AGCGGAAGAA GCAGAAGCCC TGTTGGAAGA AGAGGTCGAT
GCCTTCGATA ACTGGTGGCA GTCTCTGGAT ACGGTGCCAA CGATCAACTG CCTGCGCGAC
AAGATTGAGA TGATTCGCGA GCAGGAACTC GAGAAAGCGC TGTCGCGGCT GGGCACGGAG
TTTGGCGACA AACATCAAGC GGTGGTGGAA GCCCTGACTC GTGGCATCGT CAACAAAATC
CTGCATGACC CGATGGTGCA GCTGCGATCG CAACAGGATA TCGAAGCCCG CCGCCGGGCC
GTCGATGCCC TGCAAATGCT GTTCAATCTC GATCCACAAG GACAGTTGAG TAGCTGA
 
Protein sequence
MHLAVVGLSH RTAPVAVREK LSIPEQQVEA AIQQLKSYPH IEEVAILSTC NRLEIYCVTR 
ATEPGVREIT QFLSEHSHLP LGELRPHLFV LLHQDAVMHL MRVAAGLDSL VLGEGQILSQ
VKTMYKLGQQ YEGVGRILNR LLKQAVTAGK RVRTETSIGT GAVSISSAAV ELAQLKVIAR
DDRSDGNLAG QRVLILGAGK MSRLLVQHLI AKGADTIQIL NRTLGRAEEL AKQYGGDLQI
QVGLLSGLMN AIVEADIVFT STSATDPILD RAKLEMVLAP EQRLMLIDIA VPRNVAADVV
ELTSVESYNV DDLREVVAQN QESRRKLAEE AEALLEEEVD AFDNWWQSLD TVPTINCLRD
KIEMIREQEL EKALSRLGTE FGDKHQAVVE ALTRGIVNKI LHDPMVQLRS QQDIEARRRA
VDALQMLFNL DPQGQLSS