Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0484 |
Symbol | |
ID | 3774722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 469432 |
End bp | 470874 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637798891 |
Product | hypothetical protein |
Protein accession | YP_399503 |
Protein GI | 81299295 |
COG category | [R] General function prediction only |
COG ID | [COG1266] Predicted metal-dependent membrane protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0842949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACAGC GAGAGCCCAT GGGCATACGG CGATTACTAG TCTGGAGTTT GTCTCTGCTG GCCTGCCTCT TGATGGGCAA TGTGTTGCTG AATAGTTGGC AGCAACCGCA GGTCCAGAGT CAGTTGGAAT TGCGGCAGAA CGAGTTGTCG CTGCAGCTCT TACAGCTTCA GGATCAGTGG GCTAGTGCTG ATGGCGATCG CCAAACCACG CTTGCTACGG CTGAGCGTAG TTTTCGCCAA AGAGTTGAAC AACTCCAAAC AAATAGTGCT TCAGGGCTCC TCGTCCAGAC GGATCAGCTC AGCCAAGCAC AGCTGGAATT AGGGGTGATT GAGGCGGTCA ATGGCAATGC TCCAGCTGCG ATCGCCACTT GGGAAAATGC GATCGCCACG GCTTTACCCA ACTCCCCCAA TCCGCAGACT GCCACGGTTC TGATCGGCCT CTGGCAAGAT CCGCCCCGAC TGCTCCCCGA TGCCGAACCG CAATTGCGAT CGCAGCTACG GGGCTGGTTT CAAACTCAGT CCCTCGAGCA GCTCTACCGT CTCCAACAGC GTTCTGATGC CCTTGCCAGT CTGGTCAAGC GCCAAAATCG GGCGGCTTGG CAAGCCCTGA TCGCCCTGCT ACTGCTCAAC GGGCTACCCC TCGTCGGTTC AATTCTGGGA CTGGGCATTT TGGGCTACTT AGGCTGGCGG CGCTGGCGCA AGCAACCCTT CCCACCACTG CAGGGCTGGA CGGTGCCCTG GGATTCCACT GTGGTGGCCT GGATCATGCT GCCGGGCTTC ATCTTGATCG GCCAGATTGG CCTCAATCAA TTGCTGCTCC CAACGCTACT GGCTGCCGTT GGCTTCGACA GTAGTCGCTT GGATGTCAGC GGCCAAGCAT TCTCGATCTT GGTGCGCTAC AGCCTGATGG CGGGGCTGGT TCTGGGGCTG CTGGCCTGGA CGCTACAGCG CTATCGTCCC CTGCCACCCG ATTGGTTTGT CCTGCGCTGG CGATCGCGCT GGCCCTTGTG GGGCATTGGG GGCTATTGGG TCGCTCTGCC CGTAGTGATT GGGACCTCAC TCCTCAACCA ACTGATCTGG CAGGGCCGTG GCGGCAGTAA TCCGCTGCTG GAGTTGGTGC TGGATAGCGG CAGCCGCAGC GCCCTGTTCT GGTTCTGGGT GACGGCGGCG ATCGCGGCGC CCCTATTTGA GGAAGTGCTA TTTCGGGGTT TTCTGCTGGC CTCCCTCACC CGCTGGCTAC CAGTGCGCGG CGCGATCGCC CTCAGTGGCC TACTCTTTGC CCTAGCCCAC CTCAGCCTGT CGGAAGTGCT GCCCTTGTTT GCCCTCGGCT GTCTATTGGG CGAGGTCTAC ACCCGTAGCC GTAACCTTTT AGCCCCAATG CTCTTGCATG GCCTTTGGAA TAGCGGCACC TTAATCAGCC TGCTCTTGCT CAGCCAGCCT TAG
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Protein sequence | MLQREPMGIR RLLVWSLSLL ACLLMGNVLL NSWQQPQVQS QLELRQNELS LQLLQLQDQW ASADGDRQTT LATAERSFRQ RVEQLQTNSA SGLLVQTDQL SQAQLELGVI EAVNGNAPAA IATWENAIAT ALPNSPNPQT ATVLIGLWQD PPRLLPDAEP QLRSQLRGWF QTQSLEQLYR LQQRSDALAS LVKRQNRAAW QALIALLLLN GLPLVGSILG LGILGYLGWR RWRKQPFPPL QGWTVPWDST VVAWIMLPGF ILIGQIGLNQ LLLPTLLAAV GFDSSRLDVS GQAFSILVRY SLMAGLVLGL LAWTLQRYRP LPPDWFVLRW RSRWPLWGIG GYWVALPVVI GTSLLNQLIW QGRGGSNPLL ELVLDSGSRS ALFWFWVTAA IAAPLFEEVL FRGFLLASLT RWLPVRGAIA LSGLLFALAH LSLSEVLPLF ALGCLLGEVY TRSRNLLAPM LLHGLWNSGT LISLLLLSQP
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