Gene Synpcc7942_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0482 
Symbol 
ID3774720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp467004 
End bp468773 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content56% 
IMG OID637798889 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_399501 
Protein GI81299293 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.635287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.182989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTAC TGCCGCAAGC GAGAGGAGGT CGGAATTCCC GGCGATCACC GCGTCGCTCA 
GTACCGCAGC AGGTCATTGA ACCACGGCGA ATACTCGCCA TTTGGCTACT GCTGGTGATT
GGCGCTGCTC TCTTAGGTTG GCGTCTGTTT ACCGTGCAGG TGCTAGAAGG GCCAATGCTC
CGACAAAAAG CCACGGAACA GCAGCGAGTG ATGCTGTCGC CCTTCCTGCC ACGGCGGCCC
ATCATCGATC AGCAGGGCAA TCTGATTGCC CTCGACCAAG AGATTTATAC CCTCTACGTT
CACCCCCAGC TTTTCAAAGA GCCCATTCCT AGCGTGGCCC AAAAACTGGC GCCGATTCTA
GGGATGGACG TCAGTACCCT GACACAGCGA TTCCAGTCGC AAAAGAGTGG CATTCGCCTG
CGATCGGATC TGTCGCGCGA GGCCGTGACT GCTCTGCGGA AGCTTTACCT TGATGGCCTC
GAGTTTGAGC AGCGGGCCCA GCGCCTCTAT CCCTTCAAGG ATCTCTATGC CAATATCGTT
GGCTTTCTCA ACGATGAGCG CAAAGGCCAA GCTGGATTGG AATTCAGCCA GCAGAATCTC
TTGCAGCGGC CCGTCCTAAA AGCATCCGTC GAGCGATCGG GGGATGGTAG CTTGCTGCCT
GATGGTGTGC CTGCTGGCTT CCTGCACCAA GATGATATGC GGCTGCAACT CACCTTGGAT
GGCCGCCTCC AACGCACCAC ACAAACAGCA CTCCGGCAGC AATTAAAACG CTATTCCGCC
AAACGGGGCG CGGCGCTGGT GATGGATGTG CGGGATGGCT CGATGTTGGC GCTAGTCAGT
GAGCCGACCT ACGACGCCAA TCGCTATTTC GAAGCTGATC CCAAGCTCTT TAATGACTGG
GCAGTTCATG ATCTCTATGA GCCGGGGTCG ACTTTTAAGC CGATCAATAT TGCGATCGCC
CTAGAAGAGA AAGTTCTCGA CATTAACGAT GTCATCTACG ACGAAGGTCG CATCCAAGTC
GGGGGCTGGC CAATCAACAA CCACGACTTC AGCACAGCAG GCGGACGAGG ACCCCTGAAT
CTGGCGCAAG TGATGCAGTA TTCCAGCAAT GTGGCCATGG TTCACATCGT GGAACGCATG
CGGCCCCAAC GCTATTTTGA ATGGCTGCAA AAATTGCAAA TCGATAAACC CGTTGGGACT
GATTTGCCCT TTGCCACCGG CGGGCAGATC AAATCACGCG ATGAGTTTGT CAACTATGTG
ATTGAGCCTG CAACAGCAGC ATTTGGGCAG GGTTTCTCGC TGACCCCCCT CAAGCTTTTG
CAGCTGCATG CCGCGATCGC CAATGGAGGC AAACTGGTCA CGCCCCACGT CATCGCCGGA
CTAGTCGACA GTCAAGGTCA GCTCTACTGG CAGCCGCCGC GTCCTGAAGC ACCACAACTC
TTTTCTGCCG ATACGTCGAA GCAGGTCATG GGTTTGATGG AGAGTGTGGT CGCTGCCGGT
AGCGGAAAAC CAGCCCAAGT TAAAGGGTAT CGACTAGGTG GGAAAACCGG GACTGCCCAG
AAAGCAGAAA ATGGTGTGTA TGTTGCAGGG GCGCGGATCA CCAGCTTTGT GGGTGTTTTA
CCCGCAGACA ATCCACGCTA TGCCATGTTG GTCGTGGTCG ATGAGCCGAA GGGGGATGAC
GCCTACGGCT CAACGGTTGC CGCTCCCGTT GTCAAGCAAA TGGCGGAAGC CCTCGTTGCG
ATCGAGGGTT TGGCTCCTAA CCAGAATTGA
 
Protein sequence
MTVLPQARGG RNSRRSPRRS VPQQVIEPRR ILAIWLLLVI GAALLGWRLF TVQVLEGPML 
RQKATEQQRV MLSPFLPRRP IIDQQGNLIA LDQEIYTLYV HPQLFKEPIP SVAQKLAPIL
GMDVSTLTQR FQSQKSGIRL RSDLSREAVT ALRKLYLDGL EFEQRAQRLY PFKDLYANIV
GFLNDERKGQ AGLEFSQQNL LQRPVLKASV ERSGDGSLLP DGVPAGFLHQ DDMRLQLTLD
GRLQRTTQTA LRQQLKRYSA KRGAALVMDV RDGSMLALVS EPTYDANRYF EADPKLFNDW
AVHDLYEPGS TFKPINIAIA LEEKVLDIND VIYDEGRIQV GGWPINNHDF STAGGRGPLN
LAQVMQYSSN VAMVHIVERM RPQRYFEWLQ KLQIDKPVGT DLPFATGGQI KSRDEFVNYV
IEPATAAFGQ GFSLTPLKLL QLHAAIANGG KLVTPHVIAG LVDSQGQLYW QPPRPEAPQL
FSADTSKQVM GLMESVVAAG SGKPAQVKGY RLGGKTGTAQ KAENGVYVAG ARITSFVGVL
PADNPRYAML VVVDEPKGDD AYGSTVAAPV VKQMAEALVA IEGLAPNQN