| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0480 |
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| Symbol | |
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| ID | 3774718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 463901 |
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| End bp | 465634 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637798887 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_399499 |
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| Protein GI | 81299291 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.597415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGGT CTGCCTCGCG CTCGACTGCT GCGAACCCGC TGGAGCTGGC TTGGATTACG
CCGTCAGCAG CGCAACTCGC CTCCACCGCC GATCTGTACT ACGTCCAAGA TCTTCTCGGA
CGCTACCTCT CGTTTGCTTG GCGCAGTGGC CAATGGCTGG GCCTGAACAG CGAGCAAGTC
GTCGGGAGTT ACCTCAGCGA GCAGTTTACG CCGGTTGATC TCAACCTCTA CTTGGCGCGG
ATGCGGCGAG CCATGCATCG CGGCCGTGCT GAGCAATTTC GTACTGGCTT TCGTTTTCAG
GGACAGGTTT ACGTTTTCGA CCTGACGCTT AGTCCAATTC TGCAACCGCA GCAGGCCAGC
ACTTTATTAC TGGTGATTGG GCGGCAGCAG GAGCCGCTAC CCGAGGCGTT ACCAGAACCC
CCGATCGCGA TCGCGCCACC CCACCATGCC AAGCTGTTTG CCCAAATCGC CTGGGATATT
CGCCGCACCC TCGACCCTGA GACAATTTGG CGACATACGG TGCAAGGGCT TGGGCAGGCA
CTTGGACTGC AGCGTTGCTT GCTCTGTCCC TACGAGTTGG GATCAACGGC GATCGCAATT
GTGGCGGAGT ATCGTCAGGC GCACCTGCCG GTCGTCTTGG GCGAGCAATT GGCGATCGCC
AGGAATCCTT CGCTAGCGGA TGCCTTGCTG AGTTTGCGAC CCACTCAAGC AGTAGTTGAT
TTTGAACGAT CGCCAGCGGA ACCAATCTGG ATGGTTCCAA CCGGCTATCA AGATCATCCC
AACGGTGTTT TGCTGCTGCG ATCGGCGGAG GAATTGACTG CGGGCGATCG CGATCTGGTT
TGGGAGCTGG CGGATCAGGT GGGGACTGCA CTGGCTCATG CTCGCCTCTA CGCCCAAAGC
CAGGCGTTGG CCCTGGAATT GCAGCGAGCA AATCAAACTT TGTTGGAACA GCAGCAGGCC
TTGATCGAAG CCCATCGTCA GTCGGAAGCC CTTTCGCAAC TGAAGACCGA CTTCCTCGCC
AATACCTCCC ACGAGCTACG TACGCCGCTG ACCGGCATGA TTGGCTATCT GCAGCTTCTT
CAAGACGACT TGGCCGAGAC GCCAGAGGAA CGCCAGGAGT TTATTGCCGG GGCCTATCAT
TCGGCATTGC ATCTGCTAGG CATCATCAAT GACATTCTCG ATATCGCCCG CATCGAAGCC
GGACGGCTGC AGCTCCAAGC CGAAACCGTG CCACTACGGA ACTTGCTGGC GGAGGTAGAA
ACCTGTCTGC GGAGCCAAGC ACAAGCCAAA GGGCTGGTCT ATCGCTGTCG TATTGCTGCG
GAGACCGAAT CGGTTGCCCT CTGGGGCGAT CGCCAACGGT TGCTGCAGGT GCTCTTTAAC
CTCGTGGGCA ATGCGATTAA ATTTACGCTC ACTGGCTACG TTGAAGTGCG AGCAACAGCG
GTTTGGCAGC CCCTTTGCGC CAATGGGCAG AATCTACCGG GCTATCTACG GCTGGAGATT
GAAGACAGTG GTATTGGTGT TGCCCCCGAG CGACAGGGCA GTCTCTTTCA ACCCTTCAGT
CAGGCGGATA GCTCTCTGAC ACGGCAGTTT GGTGGGAGTG GCTTGGGGCT GGTGATCTGT
CGACGCTTGC TGGAGAGTAT GGGTGGCATT GTTGAACTGT TTAGCCCTGG CGAGGGTTTG
GGGACCACAG TCACCTGTCT GATCCCGCTG GCACCAGCGA TCATCCCGTC CTAG
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| Protein sequence | MSGSASRSTA ANPLELAWIT PSAAQLASTA DLYYVQDLLG RYLSFAWRSG QWLGLNSEQV
VGSYLSEQFT PVDLNLYLAR MRRAMHRGRA EQFRTGFRFQ GQVYVFDLTL SPILQPQQAS
TLLLVIGRQQ EPLPEALPEP PIAIAPPHHA KLFAQIAWDI RRTLDPETIW RHTVQGLGQA
LGLQRCLLCP YELGSTAIAI VAEYRQAHLP VVLGEQLAIA RNPSLADALL SLRPTQAVVD
FERSPAEPIW MVPTGYQDHP NGVLLLRSAE ELTAGDRDLV WELADQVGTA LAHARLYAQS
QALALELQRA NQTLLEQQQA LIEAHRQSEA LSQLKTDFLA NTSHELRTPL TGMIGYLQLL
QDDLAETPEE RQEFIAGAYH SALHLLGIIN DILDIARIEA GRLQLQAETV PLRNLLAEVE
TCLRSQAQAK GLVYRCRIAA ETESVALWGD RQRLLQVLFN LVGNAIKFTL TGYVEVRATA
VWQPLCANGQ NLPGYLRLEI EDSGIGVAPE RQGSLFQPFS QADSSLTRQF GGSGLGLVIC
RRLLESMGGI VELFSPGEGL GTTVTCLIPL APAIIPS
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