Gene Synpcc7942_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0476 
SymbolclpS 
ID3773422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp460552 
End bp460962 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID637798883 
ProductATP-dependent Clp protease adaptor 
Protein accessionYP_399495 
Protein GI81299287 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCCC AACCTGATGA GAGCGTTCTT AGTATTCTAG GCGTCCCTCG CCCTTGTGTT 
AAAAAACGAT CGAGAGACGA TGCTTTTGTT TTGACCGTGT TGACCTGTTC TCTGCAAGCG
ATCGCCGCAC CAGCTACTGC CCCGGGTACA ACGACAACGC GGGTTCGCCA GCCCTATCCG
CACTTCCGTG TGATCGTGCT CGATGATGAC GTCAATACGT TTCAGCACGT GGCGGAATGC
CTGCTGAAAT ACATTCCGGG CATGACCGGC GATCGCGCTT GGGATCTCAC GAATCAGGTC
CACTACGAAG GAGCCGCCAC CGTTTGGAGC GGCCCCCAAG AGCAAGCGGA GCTCTATCAC
GAACAGTTGC GGCGTGAAGG CCTGACCATG GCACCGCTAG AAGCGGCTTG A
 
Protein sequence
MSPQPDESVL SILGVPRPCV KKRSRDDAFV LTVLTCSLQA IAAPATAPGT TTTRVRQPYP 
HFRVIVLDDD VNTFQHVAEC LLKYIPGMTG DRAWDLTNQV HYEGAATVWS GPQEQAELYH
EQLRREGLTM APLEAA