Gene Synpcc7942_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0473 
Symbol 
ID3773419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp459096 
End bp460202 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content58% 
IMG OID637798880 
ProductNADH:flavin oxidoreductase 
Protein accessionYP_399492 
Protein GI81299284 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT CGCTCAAACT GCTGACGCCG GTGCAAGTCG GTCGCTACGA GTTGCGCAAT 
CGCATTGTGA TGGCGCCGCT GACCCGCAAC CGTGCCACTG GGCCAGACAA TATCCCCAAC
GACCTGAACG TTCTCTATTA CCAGCAACGC GCTTCAGCAG GGCTGATTAT CACGGAAGCC
AGTCAGATTT CACCGCAAGG ACAGGGCTAC CCCCTCACCC CAGGCATCCA CTCGCCTGAA
CAGGTTGAAG GCTGGAAACC GATTGTGCAG GCCGTCCACG ATCGTGGCGG CTGCATCTTC
TTGCAGCTTT GGCACGTCGG GCGGATTTCC CATCCATCGC TGCAGCCCGA CGGCGCACTG
CCCGTTGCTC CGAGTGCAAT TCAGCCAGCA GGCATGGCTG CAACCTTCCA AGGAGAACAG
CCCTTTGTGA CGCCGCGCGC TTTGGAAACC GAGGAGATTG CGGGCATTGT GGAAGACTAT
CGCCGTGCGG CTGAAAATGC TTTAGCGGCG GGCTTTGATG GTGTTGAAGT CCACGGGGCC
AACGGCTATC TGATCGATCA GTTTTTGCAG GATGGCACCA ATCAGCGTAG CGATCGCTAT
GGTGGTTCCT TTGAAAACCG CAGCCGTTTC CTGCGCGAAG TCCTCGACGC CGTGATCAGT
GTTTGGGGAA GCGATCGCGT TGGTCTACGC CTCTCCCCTT GGGGCCAGTT CAATGACATG
CGCGACTCCG ATCCCGTCGG TCTGTTCAGC TATGTCGCCC AGATGCTGAA TCCTTACAAT
CTGGCTTACC TGCACTGGAT TGAACCGCGT TGGGACAAGG CGGAGGAAAG TCCTGAATTC
AACCAGATGG CAACGCCGGT GTTCCGATCG CTCTACAACG GTCCAGTGAT TGCCGCCGGT
GGTTACAGTC GCTCGACTGC TGAAGCCGCG ATTGCCTCGG GAGCAGCAGA TTTAGTCGCC
TTTGGCCGAC TCTACATCTC CAATCCCGAC CTGGTGGAGC GTTTTGCCTT AGATGCGCCC
CTTAATCCCT ACGATCGCAA CACCTTCTAC GGTGGCGATG AGCACGGCTA CACCGACTAT
CCCAGTTTGG AAGCAGCATC TGTCTAA
 
Protein sequence
MSESLKLLTP VQVGRYELRN RIVMAPLTRN RATGPDNIPN DLNVLYYQQR ASAGLIITEA 
SQISPQGQGY PLTPGIHSPE QVEGWKPIVQ AVHDRGGCIF LQLWHVGRIS HPSLQPDGAL
PVAPSAIQPA GMAATFQGEQ PFVTPRALET EEIAGIVEDY RRAAENALAA GFDGVEVHGA
NGYLIDQFLQ DGTNQRSDRY GGSFENRSRF LREVLDAVIS VWGSDRVGLR LSPWGQFNDM
RDSDPVGLFS YVAQMLNPYN LAYLHWIEPR WDKAEESPEF NQMATPVFRS LYNGPVIAAG
GYSRSTAEAA IASGAADLVA FGRLYISNPD LVERFALDAP LNPYDRNTFY GGDEHGYTDY
PSLEAASV