Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0467 |
Symbol | |
ID | 3773413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 454004 |
End bp | 454837 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637798874 |
Product | peptidase, metallopeptidase |
Protein accession | YP_399486 |
Protein GI | 81299278 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5549] Predicted Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGGCTG GCTCAACCGC GCCGCTGGCT AGTTCTGTGC GGGTTCAGCG ATCGCGACTA TGGCGACAGG GATTACTCCT ATCGCTTCTA CTAACTTTGC TGGCCGTGGC GCTTCCGATC GCTAGTCACT CAGCATCACC GAGCGATCGC TGTCAGGCTG ATCGCAGTCG GCAAGTTTTG TCGAACAGCA CCGAATTGCC GATCGCCCAA CGAGTACATC CTTTGCCCGG CAACTGGGCT GGTTTGCCGC AGTCCAGCAA TCACTATCTC GAGGCGATCG CTCCTAGTCG CTACGGATAC TTGGTTTGGG CGGTGTCGCC GCTCTGTATC TACATTGAGC CTGCGAGTGT GGGCGACACA GCGGCGGAGC AACGGCAACA GCAGTGGCAG CAGGCAGTCA ATCAAGCTGT GGCAGACTGG CGCCCCTACT TTGACCTCCA GCTCGTCAGT AATCCTGCAA AGGCAGACAT CAGCATTTGG CGGCGATCGC CACCGCTCCG CCGCAATGCA GACGGGCAGC TCGATCGGGC TCGCACCGCT GAAACCAGCT TAGTCTTCTA CCGCGAAGGC GATCGCGCCT TACCCCGCTA CCGAATTGAC CTCGGCCTCA CGCAGGGCTT TGCCGGGCTG GTCTCTACTG CTCGCCATGA GTTGGGCCAT GCTTTTGGCC TCTGGGGTCA TAGCGATCAA CCTGAGGATG TGATGTACGT CGCTCAGTCA AGCCGCAATA TTCAGCTGAC CGACCGCGAC CTAGGAACGC TGCGGCACCT CTACCAGCAA CCGACCCAGC TGGGCTGGCC GCTGCCGCGA TCGCAGGATG GGCGGTCGCA GTAG
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Protein sequence | MQAGSTAPLA SSVRVQRSRL WRQGLLLSLL LTLLAVALPI ASHSASPSDR CQADRSRQVL SNSTELPIAQ RVHPLPGNWA GLPQSSNHYL EAIAPSRYGY LVWAVSPLCI YIEPASVGDT AAEQRQQQWQ QAVNQAVADW RPYFDLQLVS NPAKADISIW RRSPPLRRNA DGQLDRARTA ETSLVFYREG DRALPRYRID LGLTQGFAGL VSTARHELGH AFGLWGHSDQ PEDVMYVAQS SRNIQLTDRD LGTLRHLYQQ PTQLGWPLPR SQDGRSQ
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