Gene Synpcc7942_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0467 
Symbol 
ID3773413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp454004 
End bp454837 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content61% 
IMG OID637798874 
Productpeptidase, metallopeptidase 
Protein accessionYP_399486 
Protein GI81299278 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5549] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGCTG GCTCAACCGC GCCGCTGGCT AGTTCTGTGC GGGTTCAGCG ATCGCGACTA 
TGGCGACAGG GATTACTCCT ATCGCTTCTA CTAACTTTGC TGGCCGTGGC GCTTCCGATC
GCTAGTCACT CAGCATCACC GAGCGATCGC TGTCAGGCTG ATCGCAGTCG GCAAGTTTTG
TCGAACAGCA CCGAATTGCC GATCGCCCAA CGAGTACATC CTTTGCCCGG CAACTGGGCT
GGTTTGCCGC AGTCCAGCAA TCACTATCTC GAGGCGATCG CTCCTAGTCG CTACGGATAC
TTGGTTTGGG CGGTGTCGCC GCTCTGTATC TACATTGAGC CTGCGAGTGT GGGCGACACA
GCGGCGGAGC AACGGCAACA GCAGTGGCAG CAGGCAGTCA ATCAAGCTGT GGCAGACTGG
CGCCCCTACT TTGACCTCCA GCTCGTCAGT AATCCTGCAA AGGCAGACAT CAGCATTTGG
CGGCGATCGC CACCGCTCCG CCGCAATGCA GACGGGCAGC TCGATCGGGC TCGCACCGCT
GAAACCAGCT TAGTCTTCTA CCGCGAAGGC GATCGCGCCT TACCCCGCTA CCGAATTGAC
CTCGGCCTCA CGCAGGGCTT TGCCGGGCTG GTCTCTACTG CTCGCCATGA GTTGGGCCAT
GCTTTTGGCC TCTGGGGTCA TAGCGATCAA CCTGAGGATG TGATGTACGT CGCTCAGTCA
AGCCGCAATA TTCAGCTGAC CGACCGCGAC CTAGGAACGC TGCGGCACCT CTACCAGCAA
CCGACCCAGC TGGGCTGGCC GCTGCCGCGA TCGCAGGATG GGCGGTCGCA GTAG
 
Protein sequence
MQAGSTAPLA SSVRVQRSRL WRQGLLLSLL LTLLAVALPI ASHSASPSDR CQADRSRQVL 
SNSTELPIAQ RVHPLPGNWA GLPQSSNHYL EAIAPSRYGY LVWAVSPLCI YIEPASVGDT
AAEQRQQQWQ QAVNQAVADW RPYFDLQLVS NPAKADISIW RRSPPLRRNA DGQLDRARTA
ETSLVFYREG DRALPRYRID LGLTQGFAGL VSTARHELGH AFGLWGHSDQ PEDVMYVAQS
SRNIQLTDRD LGTLRHLYQQ PTQLGWPLPR SQDGRSQ