| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0459 |
|---|
| Symbol | |
|---|
| ID | 3773405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 447057 |
|---|
| End bp | 448166 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637798866 |
|---|
| Product | glutathione-dependent formaldehyde dehydrogenase |
|---|
| Protein accession | YP_399478 |
|---|
| Protein GI | 81299270 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAC GCGCTGCGAT CGCTTGGGCT GCAGGTCAAC CGCTGACGAT CGAGGAAGTT
GATGTTCAGG CTCCACAAGC CGGCGAAGTC ATGGTCAAGC TGGTGGCGAC GGGTGTTTGC
CACACTGATG CCTTTACTCT GAGTGGCGCC GATCCCGAGG GAATTTTTCC CTGTATTCTC
GGCCACGAAG GGGCAGGGAT CGTCGTTGAA GTCGGTGAGG GTGTGACTTC TGTCGCCGTT
GGGGATCACG TTATTCCGCT CTACACGCCA GAATGCGGCG AATGTAAGTT CTGTAAATCC
GGCAAGACCA ATCTTTGCCA AGCGATTCGC GCTACCCAAG GCAAAGGCCT AATGCCAGAC
GGCACCAGCC GTTTTAGTCT CAACGGCCAG CCGATCTATC ACTTCATGGG CACGTCAACC
TTCTCGGAGT ACACCGTGCT GCCGGAGATT GCGATCGCCA AAATCAATCC AGCCGCCGCA
CTGGATAAGG TCTGTTTGCT GGGCTGCGGC ATCACCACCG GCATCGGTGC GGTTCTGAAC
ACCGCTAAAG TCGAGCCGGG TTCGACTGTT GCGGTCTTTG GTCTGGGCGG CGTCGGCCTC
AGCGTCATTC AAGGGGCAGT GCTAGCGAAA GCGAGTCGGA TTCTGGCGAT CGATATCAAC
CCCGATAAAG CGGAGTTCGC CAAACAGTTA GGCGCGACCG ATTTCATCAA TCCCAAGGAC
TACGATCGCC CGATCCAAGA AGTAATTGTT GAGTTGACCG ATGGCGGCGT CGATTACAGC
TTTGAAGCGA TCGGCAATGT CAACACGATG CGCGCTGCGC TGGAAAGCTG CCACAAGGGC
TGGGGCGAAT CGACGATCAT CGGTGTGGCC GGAGCCGGTC AAGAAATTTC AACGCGACCG
TTCCAACTGG TAACTGGACG GGTTTGGCGC GGGAGTGCTT TTGGTGGCGT TAAGGGTCGT
AGCCAACTGC CGGGTTATGT CGAGCAGTAT CTTAACGGCC AAATCAAGGT CGATGAGTTC
GTCACCGAGA CGCGCCCACT CGAGGAAATT AACGAAGCCT TCGAGGATAT GCACGCAGGC
AAAGTGATTC GCACCGTCAT CACCTTTTAA
|
|---|
| Protein sequence | MKSRAAIAWA AGQPLTIEEV DVQAPQAGEV MVKLVATGVC HTDAFTLSGA DPEGIFPCIL
GHEGAGIVVE VGEGVTSVAV GDHVIPLYTP ECGECKFCKS GKTNLCQAIR ATQGKGLMPD
GTSRFSLNGQ PIYHFMGTST FSEYTVLPEI AIAKINPAAA LDKVCLLGCG ITTGIGAVLN
TAKVEPGSTV AVFGLGGVGL SVIQGAVLAK ASRILAIDIN PDKAEFAKQL GATDFINPKD
YDRPIQEVIV ELTDGGVDYS FEAIGNVNTM RAALESCHKG WGESTIIGVA GAGQEISTRP
FQLVTGRVWR GSAFGGVKGR SQLPGYVEQY LNGQIKVDEF VTETRPLEEI NEAFEDMHAG
KVIRTVITF
|
|---|
| |