Gene Synpcc7942_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0449 
Symbol 
ID3773394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp438675 
End bp439961 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content58% 
IMG OID637798855 
Productseryl-tRNA synthetase 
Protein accessionYP_399468 
Protein GI161344096 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGACC TTCGTTTGCT GCGTGAAAAT CCTGAGGCGA CCCAAGCGCG CCTCGATCGC 
CGCCACTCTA GCTACGATAT CCAGCCTCTG CTGAGCCTCG ATCAACAGGT GCGGCAGTGG
GAGCAAGAGC GAACCCAGCT CCAAGCCCGC AGCAATGAGA TTGGGCGGAG TGTTGGCCAA
AAAATGCGCG AAGGGGCTGA CCCGCAAAGT GAAGAAATTG CAGCGCTCCG GGAAGAGGGG
AACCAGCTCA AGCAACAGAT TGCTGACCTC GAACAGCAAG AGCGTCAGGT CCGCAGCGAG
CTCGACACCT ACCTATTAAC CCTGCCGAAT CTGCCCGACG AGACGGTCCC CCTCGGCAGT
AGTGAGGACG AGAACCGCGA GATCCACCGC TGGGGCGACG ACCGCATTCG TGAGGGTGAA
TTTGCGCCGC ACTGGGAAAT TGGCGAGCGA CTGGGACTAT TTGATTTCGA GCGTTCGACG
CGCATTGCCC AGAGTCGCTT TGTAACGCTA CTGGGTGCGG GCGCGGCTTT GGAGCGAGCT
TTGATCGCTT TCATGCTCGA TCGCCAAACG GCCGCAGGCT ACACCGAGGT GGCGCCTCCC
TACCTGATCA ACAGTGCCTC ATTGACCGCT TCGGGTCAGC TGCCCAAATT TTCTGAAGAA
AGTTTCCGCT GCGATCGCGA CGACCTCTGG CTGACCCCGA CAGCAGAAGT GCCGCTGACC
AGTCTCTATC GCGATGAAAT TCTCAGCGCT GACCAACTGC CACTGCGCTA CTGCGCCTAC
ACCCCTTGCT TCCGGCGCGA AGCAGGTAGC TATGGCCGCG ACACACGGGG ATTGATTCGA
CTCCACCAGT TCAACAAAGT TGAGCTCTAT CAGTTCGTCC ATCCTGACCA TTCCGAAGCA
GCTCATCAGC AACTCCTTGC CAATGCTGAA GCGATTCTGC AGGCTTTGGA ACTGCCCTAT
CGCACGATCG AACTCTGTAC CGGCGATTTG GGCTTTTCAG CTCAGAAAAC CTACGACATT
GAAGTCTGGC TACCCTCAGC AGGGCGCTAC CGCGAAATTT CTAGCTGCTC CAACTGCGGT
GATTTCCAAG CGCGGCGCGC CAACATCCGC TTCAAAGAAG CAGGTCAAAA AGGGACGCGC
TTTGTCCACA CGCTGAATGG CTCGGGTCTT GCTGTGGGTC GGACCATGGC AGCAGTTCTA
GAAAACTACC AGCAGCCAGA CGGCAGTGTA CGCGTGCCCG AAGCCCTACA GCCCTACCTC
CGCCAGACCG TGATTGGCCA GCCTTAA
 
Protein sequence
MLDLRLLREN PEATQARLDR RHSSYDIQPL LSLDQQVRQW EQERTQLQAR SNEIGRSVGQ 
KMREGADPQS EEIAALREEG NQLKQQIADL EQQERQVRSE LDTYLLTLPN LPDETVPLGS
SEDENREIHR WGDDRIREGE FAPHWEIGER LGLFDFERST RIAQSRFVTL LGAGAALERA
LIAFMLDRQT AAGYTEVAPP YLINSASLTA SGQLPKFSEE SFRCDRDDLW LTPTAEVPLT
SLYRDEILSA DQLPLRYCAY TPCFRREAGS YGRDTRGLIR LHQFNKVELY QFVHPDHSEA
AHQQLLANAE AILQALELPY RTIELCTGDL GFSAQKTYDI EVWLPSAGRY REISSCSNCG
DFQARRANIR FKEAGQKGTR FVHTLNGSGL AVGRTMAAVL ENYQQPDGSV RVPEALQPYL
RQTVIGQP