Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0449 |
Symbol | |
ID | 3773394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 438675 |
End bp | 439961 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798855 |
Product | seryl-tRNA synthetase |
Protein accession | YP_399468 |
Protein GI | 161344096 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCGACC TTCGTTTGCT GCGTGAAAAT CCTGAGGCGA CCCAAGCGCG CCTCGATCGC CGCCACTCTA GCTACGATAT CCAGCCTCTG CTGAGCCTCG ATCAACAGGT GCGGCAGTGG GAGCAAGAGC GAACCCAGCT CCAAGCCCGC AGCAATGAGA TTGGGCGGAG TGTTGGCCAA AAAATGCGCG AAGGGGCTGA CCCGCAAAGT GAAGAAATTG CAGCGCTCCG GGAAGAGGGG AACCAGCTCA AGCAACAGAT TGCTGACCTC GAACAGCAAG AGCGTCAGGT CCGCAGCGAG CTCGACACCT ACCTATTAAC CCTGCCGAAT CTGCCCGACG AGACGGTCCC CCTCGGCAGT AGTGAGGACG AGAACCGCGA GATCCACCGC TGGGGCGACG ACCGCATTCG TGAGGGTGAA TTTGCGCCGC ACTGGGAAAT TGGCGAGCGA CTGGGACTAT TTGATTTCGA GCGTTCGACG CGCATTGCCC AGAGTCGCTT TGTAACGCTA CTGGGTGCGG GCGCGGCTTT GGAGCGAGCT TTGATCGCTT TCATGCTCGA TCGCCAAACG GCCGCAGGCT ACACCGAGGT GGCGCCTCCC TACCTGATCA ACAGTGCCTC ATTGACCGCT TCGGGTCAGC TGCCCAAATT TTCTGAAGAA AGTTTCCGCT GCGATCGCGA CGACCTCTGG CTGACCCCGA CAGCAGAAGT GCCGCTGACC AGTCTCTATC GCGATGAAAT TCTCAGCGCT GACCAACTGC CACTGCGCTA CTGCGCCTAC ACCCCTTGCT TCCGGCGCGA AGCAGGTAGC TATGGCCGCG ACACACGGGG ATTGATTCGA CTCCACCAGT TCAACAAAGT TGAGCTCTAT CAGTTCGTCC ATCCTGACCA TTCCGAAGCA GCTCATCAGC AACTCCTTGC CAATGCTGAA GCGATTCTGC AGGCTTTGGA ACTGCCCTAT CGCACGATCG AACTCTGTAC CGGCGATTTG GGCTTTTCAG CTCAGAAAAC CTACGACATT GAAGTCTGGC TACCCTCAGC AGGGCGCTAC CGCGAAATTT CTAGCTGCTC CAACTGCGGT GATTTCCAAG CGCGGCGCGC CAACATCCGC TTCAAAGAAG CAGGTCAAAA AGGGACGCGC TTTGTCCACA CGCTGAATGG CTCGGGTCTT GCTGTGGGTC GGACCATGGC AGCAGTTCTA GAAAACTACC AGCAGCCAGA CGGCAGTGTA CGCGTGCCCG AAGCCCTACA GCCCTACCTC CGCCAGACCG TGATTGGCCA GCCTTAA
|
Protein sequence | MLDLRLLREN PEATQARLDR RHSSYDIQPL LSLDQQVRQW EQERTQLQAR SNEIGRSVGQ KMREGADPQS EEIAALREEG NQLKQQIADL EQQERQVRSE LDTYLLTLPN LPDETVPLGS SEDENREIHR WGDDRIREGE FAPHWEIGER LGLFDFERST RIAQSRFVTL LGAGAALERA LIAFMLDRQT AAGYTEVAPP YLINSASLTA SGQLPKFSEE SFRCDRDDLW LTPTAEVPLT SLYRDEILSA DQLPLRYCAY TPCFRREAGS YGRDTRGLIR LHQFNKVELY QFVHPDHSEA AHQQLLANAE AILQALELPY RTIELCTGDL GFSAQKTYDI EVWLPSAGRY REISSCSNCG DFQARRANIR FKEAGQKGTR FVHTLNGSGL AVGRTMAAVL ENYQQPDGSV RVPEALQPYL RQTVIGQP
|
| |