| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0448 |
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| Symbol | |
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| ID | 3773393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 437534 |
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| End bp | 438628 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637798854 |
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| Product | hypothetical protein |
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| Protein accession | YP_399467 |
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| Protein GI | 81299259 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTTC TGGCTGCGAT CGCTGTCTTA GCGTTGCTGA TTGTGGTGCA TGAAGCCGGT
CACTTTTTGG CAGCACGCTG GCAAGGGATT TACGCCAACC GCTTTTCGAT TGGCTTTGGG
CCTGTGCTAC TGCGCTACCA AGGGAAAGAA ACAGAGTATG CGCTGCGGGC CTTTCCCTTA
GGCGGCTACG TCGGCTTCCC TGACGATGAC CCCGACAGCA CCATCGATCC CCGCGATCCC
AATCTGCTGC GCAACCGCCC TGTCCTCGAT CGCGCCATTG TGATCAGCGC TGGCGTGATT
GCCAACCTCA TCTTTGCCTT CGTGATTTTG GTCACCCAAG TTTCGATCGT TGGGATCCCC
CAATCGCTGC AGCCCCAGCC GGGCATCATC GTGCCCCATG TCATGGGGGA GAAAACCCCT
GCGGCGATCG CGGGCTTGCA AGCGGGTGAC ATCATCACGG CCCAGGCCGG TCAAACCCTG
GGTAGTGGCG AGCAAACGGT GAAGTCGTTT ATTCAAACGA TCAAAACTAG CGCCGGCCAG
ACGATTCCAA TCACCGTGCA GCGGAATGGC AGCAACCTGC AACTTTCCCT GACGCCGGAG
ACAGGGGCCG ATGGCCAAGG CCGGATTGGC GTGCAACTCG CACCCAATGG CCAAATCAAC
TACCGACGAC CGAAAGGCCC AGGTGAAGTG CTGCGGTTGG CCTCCCAGCA GTTTGAGGAG
ATCTTTCGAC GCACCGTGCA AGGCTTTGGT CAGCTGGTGA CCAACTTCCA AGAGACGGCA
GGCCAAGTTT CAGGCCCTGT CAAAATCGTC GAATGGGGTG CCAATATCGC AGCGAGTGAC
TCGGGCAACC TCTTCTTCTT TGCTGCTTTG ATCAGCGTTA ACCTCGCTGT GATCAACATC
CTGCCGCTGC CAGCCCTCGA CGGCGGTCAA CTCTTCTTCC TGGCGATCGA AGCCCTCCAG
GGTCGGCCTC TACCTCGCAA ATTGCAGGAA GGCGTAATGC AGACGGGCCT GATGCTGCTC
TTGGGTTTGG GTATTGTGCT GATTGTGCGC GACACCACCC AACTGGCTTG GGTTCAGCAA
TTTCTCCAAC AGTGA
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| Protein sequence | MSVLAAIAVL ALLIVVHEAG HFLAARWQGI YANRFSIGFG PVLLRYQGKE TEYALRAFPL
GGYVGFPDDD PDSTIDPRDP NLLRNRPVLD RAIVISAGVI ANLIFAFVIL VTQVSIVGIP
QSLQPQPGII VPHVMGEKTP AAIAGLQAGD IITAQAGQTL GSGEQTVKSF IQTIKTSAGQ
TIPITVQRNG SNLQLSLTPE TGADGQGRIG VQLAPNGQIN YRRPKGPGEV LRLASQQFEE
IFRRTVQGFG QLVTNFQETA GQVSGPVKIV EWGANIAASD SGNLFFFAAL ISVNLAVINI
LPLPALDGGQ LFFLAIEALQ GRPLPRKLQE GVMQTGLMLL LGLGIVLIVR DTTQLAWVQQ
FLQQ
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