| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0447 |
|---|
| Symbol | |
|---|
| ID | 3773392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 436851 |
|---|
| End bp | 437537 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637798853 |
|---|
| Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
|---|
| Protein accession | YP_399466 |
|---|
| Protein GI | 81299258 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR01083] endonuclease III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACAC CTCGCTTGTC TAAAAAGCAG CGGGCACTGG CAGTTTTGGC TGAGCTCAAG
CAGCTCTATC CCGAAGCACC CTGCTCGCTG GACTATGAAA CGCCCCTACA ACTGCTGGTG
GCGACGATTT TGTCAGCGCA ATGCACCGAT GCCAGGGTCA ACTTGGTGAC GCCGGCGCTG
TTTGCGCGCT TTCCTGATGC TCCTGCTTTT GCAGCGGCGG ATGTGGGTGA GATTGAAGAG
CTGATCCGCT CCACGGGGTT TTATCGCAAC AAGGCGAAGA ACATTCATGC CGCTAGTCGC
CGCATTGTCG AGGTCTACGG GGGCGAAGTC CCGCAATCGA TGCCAGAGTT GCTGACTCTG
GCGGGGGTTG CCCGCAAGAC CGCCAACGTT GTCCTAGCCC ATGCCTTCGG GATTAATGCT
GGTGTCACGG TGGATACCCA CGTCAAACGG CTGGCGAATC GCCTCGGCTT CACCACTCAC
ACAGATCCCA TCAAGATTGA GCAGGATCTC ATGAAACTGC TGCCCCAGCC CGACTGGGAA
AACTGGTCAA TTCGGTTGGT CTACCATGGC CGCGCCGTTT GCGATGCCCG TAAACCTGCT
TGCGATCGCT GCAGTTTGGC TGACCATTGC AGCACCTTTC GCCGGACAGC CCGAAAGGCC
TCTGGTATTA TGGAGAATGC TGTCTAA
|
|---|
| Protein sequence | MTTPRLSKKQ RALAVLAELK QLYPEAPCSL DYETPLQLLV ATILSAQCTD ARVNLVTPAL
FARFPDAPAF AAADVGEIEE LIRSTGFYRN KAKNIHAASR RIVEVYGGEV PQSMPELLTL
AGVARKTANV VLAHAFGINA GVTVDTHVKR LANRLGFTTH TDPIKIEQDL MKLLPQPDWE
NWSIRLVYHG RAVCDARKPA CDRCSLADHC STFRRTARKA SGIMENAV
|
|---|
| |