Gene Synpcc7942_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0443 
Symbol 
ID3773388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp433076 
End bp434317 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content60% 
IMG OID637798849 
Producthypothetical protein 
Protein accessionYP_399462 
Protein GI81299254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAA CCCTCAAAGC GGGCCTCGCC TCGCTTCTCT TCATCGGCAG CAGCAGTAGC 
GCCCTCACCC TGACCTTTAG CCCTGCAGCA CTGGCACAGT CGACGCGCTT CAGCGATGTT
TCCAGCAGTT ACTGGGCTCA ACCCTTTGTG GAAGCCTTGG CTAACCGCGG CATCATCACC
GGTTTTCCTG ACGGTAGTTT CCGCCCCAAT GAACCGGTCA GCCGGGCCCA ATTCGCCGCC
ATGCTCGACA AAGCATTTAC GACTGGCAGC CAGAGATCGC CCCAAAACTT TAGCGATGTG
CCGAGTAACT ACTGGGCCCG CAACGCCATC GACTCCGCCT ACAGCCGGGG CTTCATGAGT
GGGTACACCA GCAACCGCTT TCAGCCCGAG CAAAGCATTC CTCGAGTTCA AGCTTTGGTA
TCGCTGGGGT CTGGCCTTAA CCTGAACCCG CGATCGGACA TCAACGGTAC CCTCAGCATC
TTTGCTGACA ACAGCTCGAT TCCAGACTAT GCCCGCGATC GCGTGGCTGC TGCCACAGAG
CGCAACCTCG TGGTCAACTA TCCTGACCCG CAGTTCCTCA ACCCCAATCG TTCTGCTACC
CGTGCGGAAG TCGCAGCTTT CCTCTACCAG TCCCTGGCTA GCAATGGTCA AGTTGCTCAG
GTGGACTCGC CCTACATCGT CAGCCAGAAC TCGATCCCGG TCATTCCGAG CGCCGGTATA
GCCCTTCCTC CTGGCAGCCT GATTCCGGTT CGCTACGACG CCGCTGAGCG CGTCTTGCTG
GCTCCAGGCG AAAGCATTCC GCTGACCCTG ACGGTTTCGC AGGACCTGAC GCGATCGGGC
CGGGTGGTCA TCCCTCGCGG TAGCCAAATC AACGGCGAAC TTCGTCCCGC CAACCTCGGC
AACCAAGCTG GAACACAATT TGTCGCCCGC AACTTGGTTC TGCCCAATGG TCAGACCCGA
CCGCTCAACG CTCGCTCCGA GATCATCACC GACGTGGAGA CTGTGCAGCG GGGCGCCAAT
CTCGGCAACA TTTTGACCGG GACAGCTGTT GGGGCAGCAG CAGCAGCGGT GATCAGTGGC
TTGACGGGCG ATCGCCGCAT TGATGTACTG GAAGTCTTGG GCGGCGCTGG TGTAGGTGGC
TTGCTGAGCG GCCTGCTGAT CAAAAACAAC GTTGACCTGT TGGTGGTTGA GCCGAACCGC
GACTTGGCTT TGACCCTCGA CAGCGAGTTT GCGGCCCGAT AG
 
Protein sequence
MSQTLKAGLA SLLFIGSSSS ALTLTFSPAA LAQSTRFSDV SSSYWAQPFV EALANRGIIT 
GFPDGSFRPN EPVSRAQFAA MLDKAFTTGS QRSPQNFSDV PSNYWARNAI DSAYSRGFMS
GYTSNRFQPE QSIPRVQALV SLGSGLNLNP RSDINGTLSI FADNSSIPDY ARDRVAAATE
RNLVVNYPDP QFLNPNRSAT RAEVAAFLYQ SLASNGQVAQ VDSPYIVSQN SIPVIPSAGI
ALPPGSLIPV RYDAAERVLL APGESIPLTL TVSQDLTRSG RVVIPRGSQI NGELRPANLG
NQAGTQFVAR NLVLPNGQTR PLNARSEIIT DVETVQRGAN LGNILTGTAV GAAAAAVISG
LTGDRRIDVL EVLGGAGVGG LLSGLLIKNN VDLLVVEPNR DLALTLDSEF AAR