| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0442 |
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| Symbol | |
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| ID | 3773387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 431458 |
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| End bp | 432951 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637798848 |
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| Product | ammonium transporter |
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| Protein accession | YP_399461 |
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| Protein GI | 81299253 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.757816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGAG GTGTAGCGCC TGCGTTTGCT GGGCGAAAAC CGAAGGGATG GGCGTGGGCC
TCCACTGCTG TTCCTGACTT TCAAGGGGGC TTTAAGCGCC TCATTAATCG TTTCCAAGGA
TCGAAGCTCT GGTTGGCCTG TGTGCCACTA GCGGCCACGA TCGCAGTGTT TTGGGGTGTT
GCGGCTAACG CGCAAGGTTC GGCAGATCCT GTCCCTAGCG CCCAATTCCT AGTCAACAAC
CTCTGGCTGA TGGTCGCCAC GGTGCTGGTG ATCTTCATGA ACGCCGGTTT CGCCATGGTT
GAGACTGGCC TTTGTCGCCA AAAGAACGCT GTTAACGTCT TGGCGAAAAA CCTCATCGTT
TTCACCCTGG CTGCAACCGC TTACTGGTTC ATCGGCTACT CGCTGATGTA CGGAAGCCCG
GTGGTCGATG GTTTCCTCTA CTTCGGTAAA GGTGGTCCAC TCGGTTTCTT CTTCGACCCA
ACGGTCTCGG CTGAGACGAT CAAAAACGAT GGTCTCATCT CTTCACTTGA TTTTCTCTTC
CAAGCAGCAT TTGCTGGTAC TGCTGCAACC ATCGTGTCTG GCTCTGTTGC TGAGCGAATT
AAGTTTGTCG ACTTCATCAT CTTCAGCTTG ATCCTGACGG CTGTCATTTA CCCCATTGCA
GGGTCGTGGC AGTGGAACGT CGGTTCTGGC TGGCTCAACA AAGCGGGTTT CATCGACTTT
GCTGGCTCGA CTGTTGTGCA CTCGGTTGGT GGCTGGGCTG CTCTGATTGG CGCCATCACC
CTCGGCCCAC GGATGGGTAA ATTCCAGGAC GGTCGCCCAG GTGCGCTGCC CGGTCACAAC
CTCGCGATCG CAACCTTGGG TGCGTTGATT CTCTGGATCG GCTGGTACGG CTTCAACGGC
GGTTCTGTGT TGGCCTTCAA TACTGCCGTT CCTTATGTGG CGGTCACCAC AACGCTGGGT
GGTGCTGCTG GTGGCATCTC TGCCACGATC ACGTCTTGGT CGACCTCAGG TAAGCCGGAC
TTGTCAATGG TGATCAACGG CATCTTGGCT GGCTTGGTTG GTGTCACCGC AGGTTGCGAT
GGCTTCGGTA TGGGCGGCTC CTTCATCGTC GGCTTGATTG CTGGCGTGCT GGTCGTCTTC
TCGGTCTACA CCTTCGAAAA CCTCAAGATT GACGATCCTG TCGGTGCTTG CTCGGTTCAC
TTGGTCTGCG GCATTTGGGG CACGCTGGCA GTAGGCCTGT TTAACCTTGA AAAAGGTCTC
TTCTACGGTG GTGGCTTTGG TCAACTGGGC TCTCAGATCC TAGGAATTAT TTCCTATGGT
GTCTGGACAG TTGTTGCTAG CGTCATCATC TGGAATATCC TCAAAGCCCT GCTGGGTCTG
CGAGTTTCGC CTGAAGAAGA GCTACAAGGC TTGGATATTG GCGAACACGG GATGGAAGCC
TACTCTGGCT TTGCCAAGGA TGCATCTAAC GCCCTGAGCA GCATCTCGGA ATAA
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| Protein sequence | MPRGVAPAFA GRKPKGWAWA STAVPDFQGG FKRLINRFQG SKLWLACVPL AATIAVFWGV
AANAQGSADP VPSAQFLVNN LWLMVATVLV IFMNAGFAMV ETGLCRQKNA VNVLAKNLIV
FTLAATAYWF IGYSLMYGSP VVDGFLYFGK GGPLGFFFDP TVSAETIKND GLISSLDFLF
QAAFAGTAAT IVSGSVAERI KFVDFIIFSL ILTAVIYPIA GSWQWNVGSG WLNKAGFIDF
AGSTVVHSVG GWAALIGAIT LGPRMGKFQD GRPGALPGHN LAIATLGALI LWIGWYGFNG
GSVLAFNTAV PYVAVTTTLG GAAGGISATI TSWSTSGKPD LSMVINGILA GLVGVTAGCD
GFGMGGSFIV GLIAGVLVVF SVYTFENLKI DDPVGACSVH LVCGIWGTLA VGLFNLEKGL
FYGGGFGQLG SQILGIISYG VWTVVASVII WNILKALLGL RVSPEEELQG LDIGEHGMEA
YSGFAKDASN ALSSISE
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