Gene Synpcc7942_0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0431 
Symbol 
ID3773376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp421289 
End bp422557 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content58% 
IMG OID637798837 
Producthypothetical protein 
Protein accessionYP_399450 
Protein GI81299242 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.446535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.169558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTAGCG CGATCGTGAC TGCGGCTTCT GAGACCTTTG ATGTCGTCGT TGTTGGGGCC 
GGCCCGGCTG GTGGGCAATG CGCTCGTCGG CTTGCTCAAG CAGGACGGAC AGTCTTGCTG
GTCGATCAGC TCAAGACCTG GACTGATCAT GACTTTTCGA GTGGTGGCAC CCCTCTTGAA
ACCCTCGATC GCTTTCAACT ACCCGATCGC GTTATCGGTA GTCGTTGGTC TCAGCTCCGG
GTAGTGACAA CACGAGAGGA CCATACCTGG AAGAGCGCTC GCTCGCTGGG GTGTGTTCTC
GACTTTGCGG CGTTGCGCCA GTTCCTCGCT GAGGAAACAA CCACCCACGG TGGCTCAGTG
CGGCTGGGTT GGCAATATCG CGATCGCCAG CAACTGACCG ATGGTCGTTG GCAGATCCGG
TTCCGCGATC GCCTAACCTC AAGCGATCGC TGGGTCACGA GTCGAGCCGT AGTTGATGCT
ACGGGTTCAG CCCGCAAGGT GATCTACACA GCGGCGGAGC CTCGGCCCGA TTACCTTCGG
GGTGTCGGCA TTGAGTACCT GATTGAAGTG CCTGAGACGG TCTATCAGCG CTTCGCGGAT
GCCTTGCACT TCTACCTTGG CCATCATTGG TTGCCCAAAG GCTATAGCTG GATTTTTCCG
ATGCAATCGG GCCGGCTTAA GGTTGGGGCC TGCTGGTTCC ATGGCGATCA CCGTTTTCTC
AAGCCTGACC AACCACTCCG GCACTACATT GATCTACTGC TGACGGAGCA GGTGCAGTGC
CCAGACTATC GGCTGGTTGA TGTGCATGGT GCCGCCATTG ACTACAGCGG CGATCGCTGC
GATCGCCATG TGCAAGCCTC AATTCTGGGG ATCGGGGATG CGGTTTCGGC GATCAATTTC
CTCGGCGGTG AGGGTATTCG CCATGGCTTG GAAAGTGCTG ATCGCGCTGC GCAAGTCCTC
GATGCTTGGC TTCAGGGAAC GGTACCTGAT CTCTCCAGTT ATGAACAACA AATTCGTCGC
CGTTTCGATC GCCTCTGGAC ACTCAGTCTC CGTCTGGGCA TGAAGAAATA CCTGCAGGAT
TCCGATGCCA AAATCGATCG CATCGTCCGC TGGTGCTGCG CCCTGTCCAC CGATGACCTA
ATGGCGATTT TGTTTGACTA CCGTTTCCAG CGCTTAGGCC GCCGGCTCGG GCGGTTCTTT
TGGCTGTCGG TGATGACGCG GCTGCGGCTG CGCTGGCAAC GCTGGCGGAG GCCAAGTCAT
GTCGCCTAA
 
Protein sequence
MSSAIVTAAS ETFDVVVVGA GPAGGQCARR LAQAGRTVLL VDQLKTWTDH DFSSGGTPLE 
TLDRFQLPDR VIGSRWSQLR VVTTREDHTW KSARSLGCVL DFAALRQFLA EETTTHGGSV
RLGWQYRDRQ QLTDGRWQIR FRDRLTSSDR WVTSRAVVDA TGSARKVIYT AAEPRPDYLR
GVGIEYLIEV PETVYQRFAD ALHFYLGHHW LPKGYSWIFP MQSGRLKVGA CWFHGDHRFL
KPDQPLRHYI DLLLTEQVQC PDYRLVDVHG AAIDYSGDRC DRHVQASILG IGDAVSAINF
LGGEGIRHGL ESADRAAQVL DAWLQGTVPD LSSYEQQIRR RFDRLWTLSL RLGMKKYLQD
SDAKIDRIVR WCCALSTDDL MAILFDYRFQ RLGRRLGRFF WLSVMTRLRL RWQRWRRPSH
VA