| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0428 |
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| Symbol | |
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| ID | 3773373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 416982 |
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| End bp | 418610 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637798834 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_399447 |
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| Protein GI | 81299239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.379403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGGC CAGCCTCTGC CGCGATCGCG GTCTACGACA CGACCCTGCG CGATGGCGCC
CAGCGAGAAG GCTTGTCGCT GTCGCTAGAG GACAAGCTGC GAATTGCCCA CTGCCTCGAT
CGCCTCGGGG TGAAGTTCAT TGAGGGCGGC TGGCCCGGCG CCAATCCTAA GGACGTGCAA
TTCTTCTGGG AATTACAGCA GCGGCCGCTT CAGCAAGCCG AAGTCGTAGC GTTCTGCTCC
ACCCGTCGTC CCGGTCAAAT CGCTGGCGAG GATGAACTGC TTAAAGCCCT CCTTGCTGCG
GGCACGACTT GGGTCACGAT CTTCGGTAAG TCGTGGGATC TGCATGTTGT CGAAGGGCTG
AAAACCAGTC TGGATGAGAA TCTGGTGATG ATCAGCGACA GCATCGCCTA CCTCCGCACC
TGCGATCGCC GCGTCATCTA CGATGCTGAG CATTGGTTTG ATGGCTACTT GGCGAATCCA
GATTACGCCT TGCAGACCTT GGCGGCCGCA ATTGAAGCGG GAGCCGAGTG GATCGTTCTT
TGCGACACCA ATGGCGGCTG TTTGCCCCAT CAAATCAGCG AGATTGTGGC GGCGGTGCTG
GATCGCTTCC CGAGCCTTGC GCCGGATCAA ACCGGGCCTC AACTGGGCAT CCACACCCAC
AATGATTCTG AGACTGCTGT AGCCAATGCG ATCGCGGCAG TGCAGGCCGG TGCCCGCATG
GTGCACGGCA CAATCAATGG TTACGGCGAG CGCTGTGGCA ATGCCAATCT CTGCTCTGTC
ATCCCTAACC TGCAGCTCAA GCTTGGCTAT GACTGCGTTG AAACCGAACA ACTGATGCAG
TTGACGGCGA CGAGTCGGTT GGTTAGCGAA ATCGTCAATC TCGCGCCAGA TGATCACGCT
GCCTACGTTG GTCAGTCAGC CTTCGCCCAC AAGGGCGGCA TCCACGTCAG TGCCGTGGAG
CGCAACCCGC TGACCTATGA GCACATTCGC CCCGAGCAAG TCGGCAACCT GCGCCGTATC
GTCATTTCCG AGCAATCTGG CCTCAGTAAT GTCCTTGCCA AAGCCCGCAG TTTTGGGCTG
GACTTACAGC GAAACGATCC CGCTTGTCGC GATCTCTTGG CGCGCCTCAA GGAGCTCGAA
AGTCAGGGCT ACCAATTTGA AGCGGCAGAG GCCAGCTTTG ATCTACTGAT GCGGGAAGCC
ACCGGCGATC GCCCTCACTT TTTTGACCTC AAGGATTTCC ATGTCCATTG CAGCAAGCAA
CGGCAGGAGC TAAATGCTTT AGCCACCGTT AAAGTTGCAG TTACCGGTCG CGATATTTTG
GAGTCGGCGG AAGGCAACGG TCCAGTCTCA GCGCTCGATG CAGCCCTGCG CAAAGCGATC
GGCAGCTTTT ACCCTGCCGT TATGCAATTC CACCTCTCGG ACTACAAGGT GCGGATTTTG
GATGGGGCAG CCGGAACTTC CGCTAAAACG CGCGTCTTGG TGGAGTCGAG CAACGGATCG
CAGCGCTGGT CCACTGTCGG CGTCTCGGGC AACATCATTG AGGCGTCCTA TCAAGCCGTC
GTGGAAGGGA TTGAGTATGG CCTGCTCTTG CAGCAGCAAG CGCCCCTGCA AGCTGCCGAA
AAGCCCTAG
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| Protein sequence | MTRPASAAIA VYDTTLRDGA QREGLSLSLE DKLRIAHCLD RLGVKFIEGG WPGANPKDVQ
FFWELQQRPL QQAEVVAFCS TRRPGQIAGE DELLKALLAA GTTWVTIFGK SWDLHVVEGL
KTSLDENLVM ISDSIAYLRT CDRRVIYDAE HWFDGYLANP DYALQTLAAA IEAGAEWIVL
CDTNGGCLPH QISEIVAAVL DRFPSLAPDQ TGPQLGIHTH NDSETAVANA IAAVQAGARM
VHGTINGYGE RCGNANLCSV IPNLQLKLGY DCVETEQLMQ LTATSRLVSE IVNLAPDDHA
AYVGQSAFAH KGGIHVSAVE RNPLTYEHIR PEQVGNLRRI VISEQSGLSN VLAKARSFGL
DLQRNDPACR DLLARLKELE SQGYQFEAAE ASFDLLMREA TGDRPHFFDL KDFHVHCSKQ
RQELNALATV KVAVTGRDIL ESAEGNGPVS ALDAALRKAI GSFYPAVMQF HLSDYKVRIL
DGAAGTSAKT RVLVESSNGS QRWSTVGVSG NIIEASYQAV VEGIEYGLLL QQQAPLQAAE
KP
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