Gene Synpcc7942_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0426 
Symbol 
ID3773371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp415535 
End bp416086 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content57% 
IMG OID637798832 
Productcondensin subunit ScpB 
Protein accessionYP_399445 
Protein GI81299237 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.897375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTTT CTCTGGCCGC TCGCATCGAA GCCATCCTTT ACCTCAAGGG TCAGCCCCTT 
AGCCTGACCG CGATCGCTGA ACATGCCAAA TGCGATCGCG ATGCTGCCGC TGATGCCCTG
TTGCAGTTGA TGGATGACTA CGCCCATCGC GACAGCGCCT TGGAATTACT GGAGGATGAA
CGGGGTTTCT GCCTGCAGCT GCGCCCCGCC TTACAGGAAC TGGTGCATGA ACTGCTGCCG
GTCGATTTGA CCACTGGAAC CCTGCGAACC CTCGCCGCGA TCGCTCTCAA AGGTCGCATC
GCCCAGACTG ATCTGGTTGA TCTACGCGGT TCAGGAGCCT ATCAGCAAGT GCAGGAGCTG
GTCGAACAGG GATTTATCCA AAAACGCCGC CAGTCCAATG GCCGCTCCTA CTGGCTGGAA
GTCACAGACA AGTTTCATCA GTACTTTCAA ACCGAGGGCA TGAACTTAGA AGCCCTGATT
CCCGCGCGAT CGCAATCGAC AGACAACGCG ATGGCTGAAT CCACTGCTCC AGCAGCACCA
GAAGTCGACT AA
 
Protein sequence
MTVSLAARIE AILYLKGQPL SLTAIAEHAK CDRDAAADAL LQLMDDYAHR DSALELLEDE 
RGFCLQLRPA LQELVHELLP VDLTTGTLRT LAAIALKGRI AQTDLVDLRG SGAYQQVQEL
VEQGFIQKRR QSNGRSYWLE VTDKFHQYFQ TEGMNLEALI PARSQSTDNA MAESTAPAAP
EVD