Gene Synpcc7942_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0414 
Symbol 
ID3773359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp404016 
End bp405188 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content57% 
IMG OID637798820 
Producthypothetical protein 
Protein accessionYP_399433 
Protein GI81299225 
COG category[S] Function unknown 
COG ID[COG1900] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGA TTGCAGAAAT CAATGAAAAA ATCCAGGCCG GTCGCGCCGT TGTTTGGACA 
GCTACGGAGG TTAAAGCCCG TGCACCGGAG TTAGGGATCG CTGCGATCGC CCAGCAAGTT
GATGTGATTA CCACCGGCAC CTTTGAGCCG ATGGAAGCCT CGGGGGCGAT CCTTAATCTC
GGTCAAACCG ATCCGCCGAT CAAAATTCGC CAATGCTGGT TGAATGATGT GCGCGCCTAC
TCAGGCTTTG GCGCAGCAGA TTTACTTTTG GGTGCCAGTG AAGAAAGTGA GGATCCGGAA
GCAGAGTATG GCGGCGGGCA GGTGATTGCC GATCTGATCG CGGGTCAGAA AGTGCGATTG
CGGGCGATCG GGCAAGGAAC AGATTGCTAT CCGCGCCGCA GCTTTGAAAC CACGATCGAT
CGCGACAGCA TCAACCAGTT CTATCTCTTC AATCCCCGCA ATCTCTATCA AAACTTCATC
GTTGGCGTGA ATGGTGGCGA CGAGACGCTC TACACCTACC TCGGGCCGCT GCTGCCGAAT
CTGGGCAACG CTGTCTATGC CAATCCGGGA GCGATCGCTC CACTGTTCAA TGATCCAGAT
CTGGTCAGCA TTGGCATCGG TACCCGCATT TTTCTGGGCG GCGGTGTTGG CTACATCGCT
TGGGAAGGCA CGCAGCATTT CCCGCTGCAA AAGCGTTTAC CCAATCGCAC TCCGGTGGGT
CCAGCGGCGA CCTTGGCGTT GATCGGTGAC GCTAAGCAGA TGTTGCCGGA TTGGGTGCGG
GGCTGCTATT TCCAGAACTA CGGCGCGTCC TTGATGTTGG GTGTTGGCAT CCCCTTGGCG
GTGACTACAG AAGCTGTCGT TGCGGCCTGT GCCGTCACGG ATGATCAAAT CGTGGCCCCG
GTCGTCGATT TCTCGATCCC GCGCCGCGTC CGTCCCACCT TTGGTCTGGT CAGTTACGCC
AAGCTCAAGT CCGGCAGCAT CATGCTGGAA GGCCAACGGA TTCGAACAGC ACCACTCGCC
AGCCTCTATC GATCGCAGCA GGTTGCCGAA CTGCTCAAGC AGTGGATTGA AGCCGGTGAA
TTCCTTCTGA CCGAGCCGGT TGCTAGCCTA CCCAGCGATC GCCAGTTCCA ACCCCAGGAT
CAGCGTTCGC CTTCAGCTCT CAACGACGAA TAG
 
Protein sequence
MRTIAEINEK IQAGRAVVWT ATEVKARAPE LGIAAIAQQV DVITTGTFEP MEASGAILNL 
GQTDPPIKIR QCWLNDVRAY SGFGAADLLL GASEESEDPE AEYGGGQVIA DLIAGQKVRL
RAIGQGTDCY PRRSFETTID RDSINQFYLF NPRNLYQNFI VGVNGGDETL YTYLGPLLPN
LGNAVYANPG AIAPLFNDPD LVSIGIGTRI FLGGGVGYIA WEGTQHFPLQ KRLPNRTPVG
PAATLALIGD AKQMLPDWVR GCYFQNYGAS LMLGVGIPLA VTTEAVVAAC AVTDDQIVAP
VVDFSIPRRV RPTFGLVSYA KLKSGSIMLE GQRIRTAPLA SLYRSQQVAE LLKQWIEAGE
FLLTEPVASL PSDRQFQPQD QRSPSALNDE